RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 EPOPA6NHQ4 379 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 M0QYV0 167 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PODXLO00592 558 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FSCN2O14926 492 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MEFVO15553 781 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DAPK3O43293 454 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 XPOTO43592 962 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF623O75123 536 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CILPO75339 1184 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RECQL4O94761 1208 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ECEL1O95672 775 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SYF2O95926 243 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 POMCP01189 267 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KRT1P04264 644 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FAM153BP0C7A2 387 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 VDRP11473 427 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DMDP11532 3685 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 IGFBP4P22692 258 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ECHS1P30084 290 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 COILP38432 576 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MLH1P40692 756 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SCNN1GP51170 649 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NUBP1P53384 320 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RAD23BP54727 409 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GSCP56915 257 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DMTNQ08495 405 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 INCA1Q0VD86 236 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PIGHQ14442 188 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 STILQ15468 1287 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FAM153CQ494X1 144 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C2CD6Q53TS8 623 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SGO2Q562F6 1265 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ODF2Q5BJF6 829 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LRRC38Q5VT99 294 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SCARA3Q6AZY7 606 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 AADACL2Q6P093 401 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LLGL2Q6P1M3 1020 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DENND1BQ6P3S1 775 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CCDC137Q6PK04 289 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LRIG3Q6UXM1 1119 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF771Q7L3S4 317 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.162e-6■■■■■ 29.9
MAP1LC3B-205ENST00000564638 CCDC105Q8IYK2 499 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CRIPAKQ8N1N5 446 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LRRC43Q8N309 656 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 COLGALT1Q8NBJ5 622 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C3orf20Q8ND61 904 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 EXD1Q8NHP7 514 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GRK7Q8WTQ7 553 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ATXN2LQ8WWM7 1075 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TFAP2BQ92481 460 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C18orf8Q96DM3 657 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TMEM176AQ96HP8 235 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PKNOX2Q96KN3 472 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MCEEQ96PE7 176 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TSPAN18Q96SJ8 248 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GAD1Q99259 594 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FMO2Q99518 471 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ERP44Q9BS26 406 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MRPL9Q9BYD2 267 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TRIM31Q9BZY9 425 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DNAI2Q9GZS0 605 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SDCBP2Q9H190 292 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SYNCQ9H7C4 482 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 UBN1Q9NPG3 1134 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HOMER3Q9NSC5 361 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MTRF1LQ9UGC7 380 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FAM153AQ9UHL3 310 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 BARX2Q9UMQ3 279 aaPredicted RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GIT1Q9Y2X7 761 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NR2E1Q9Y466 385 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SPTBN4Q9H254 2564 aa7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PRRC2BQ5JSZ5 2229 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PLXNA4Q9HCM2 1894 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TCRBV5S1A1TA0A578 114 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ARL5CA6NH57 179 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA6L10A6NI86 522 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NT5C1B-RDH14C9J2C7 533 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA8SH3BPF8 625 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GAS8O95995 478 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA6DP0CG33 693 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RARAP10276 462 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 BMP1P13497 986 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LAG3P18627 525 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 BMPR1AP36894 532 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PBX3P40426 434 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PTGIRP43119 386 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 AFF1P51825 1210 aaKnown RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DRG2P55039 364 aaKnown RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TAS2R40P59535 323 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ERVK-21P61565 698 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PSMC1P62191 440 aaKnown RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GPM6BQ13491 265 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PPP1R7Q15435 360 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SIX1Q15475 284 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms