RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 TRPM8Q7Z2W7 1104 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 UBR7Q8N806 425 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 STKLD1Q8NE28 680 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.98□□□□□ -1.45
CHD9-210ENST00000564582 TAF4BQ92750 862 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 THOC1Q96FV9 657 aaKnown RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 PGM2Q96G03 612 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 DHTKD1Q96HY7 919 aaPredicted RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 OLFM3Q96PB7 478 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 TMEM237Q96Q45 408 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 IWS1Q96ST2 819 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 CDC5LQ99459 802 aaKnown RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 MAP3K14Q99558 947 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 BDH2Q9BUT1 245 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 ROPN1BQ9BZX4 212 aaPredicted RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 SLITRK6Q9H5Y7 841 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 SEC61A2Q9H9S3 476 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 ROPN1Q9HAT0 212 aaPredicted RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 SPC25Q9HBM1 224 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 SLC5A4Q9NY91 659 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 CNOT7Q9UIV1 285 aaKnown RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 MSRAQ9UJ68 235 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 CNOT11Q9UKZ1 510 aaKnown RBP5.98□□□□□ -1.45
CHD9-210ENST00000564582 ZNF148Q9UQR1 794 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 VWA7Q9Y334 891 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 POGZQ7Z3K3 1410 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 PTPRUQ92729 1446 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 IGSF1Q8N6C5 1336 aa5.98□□□□□ -1.45
CHD9-210ENST00000564582 MED1Q15648 1581 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 BTNL10A8MVZ5 291 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 RNF113AO15541 343 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 FOXD2O60548 495 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 TMCC1O94876 653 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 DEXIO95424 95 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 AGTP01019 485 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 CELA3BP08861 270 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 VIL1P09327 827 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 ZNF888P0CJ79 500 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 FDPSP14324 419 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 NQO1P15559 274 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 HSPA6P17066 643 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TRIM21P19474 475 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 ATP6V1C1P21283 382 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 CALB2P22676 271 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 ABCD1P33897 745 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 CTNNA1P35221 906 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 UBXN1Q04323 297 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 PLP2Q04941 152 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 MYBPC3Q14896 1274 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 ZNF827Q17R98 1081 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 CCDC96Q2M329 555 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 USH1GQ495M9 461 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TBC1D10BQ4KMP7 808 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 COBLL1Q53SF7 1204 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 RRP12Q5JTH9 1297 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 ERMARDQ5T6L9 678 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 SLC9C2Q5TAH2 1124 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 ZNF658Q5TYW1 1059 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 HHATQ5VTY9 493 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 ARL6IP4Q66PJ3 421 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 SLFN13Q68D06 897 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 KRT40Q6A162 431 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TRIM68Q6AZZ1 485 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 FRMD7Q6ZUT3 714 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 BMP8AQ7Z5Y6 402 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 PIGWQ7Z7B1 504 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 SGMS1Q86VZ5 419 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 RAB11FIP4Q86YS3 637 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 CCDC65Q8IXS2 484 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 MB21D1Q8N884 522 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 PPFIBP2Q8ND30 876 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 OR5AN1Q8NGI8 311 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 ATXN2LQ8WWM7 1075 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 SLC5A5Q92911 643 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 LPPQ93052 612 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 PPP2R3CQ969Q6 453 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 OPTNQ96CV9 577 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 RBM41Q96IZ5 413 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 CCDC43Q96MW1 224 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 NR1H4Q96RI1 486 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 SMC6Q96SB8 1091 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 MYL10Q9BUA6 226 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TMEM109Q9BVC6 243 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 LRRC27Q9C0I9 530 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD9-210ENST00000564582 OR10A2Q9H208 303 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TAOK3Q9H2K8 898 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 BOLA2Q9H3K6 86 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 NDST4Q9H3R1 872 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 POFUT1Q9H488 388 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 TUBA8Q9NY65 449 aaPredicted RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 ATXN10Q9UBB4 475 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 SLC12A6Q9UHW9 1150 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 WDR37Q9Y2I8 494 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 NOC2LQ9Y3T9 749 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD9-210ENST00000564582 BZW2Q9Y6E2 419 aaKnown RBP5.97□□□□□ -1.45
CHD9-210ENST00000564582 COMMD3-BMI1R4GMX3 469 aa5.97□□□□□ -1.45
CHD9-210ENST00000564582 MST1RQ04912 1400 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms