RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 NFIL3Q16649 462 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 GAB4Q2WGN9 574 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 ZACNQ401N2 412 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 KMT5BQ4FZB7 885 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 HEATR6Q6AI08 1181 aaKnown RBP17.8■□□□□ 0.44
CCNF-203ENST00000564236 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
CCNF-203ENST00000564236 TMC2Q8TDI7 906 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 RNF38Q9H0F5 515 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 SEMA4GQ9NTN9 838 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 NXF1Q9UBU9 619 aaKnown RBP17.8■□□□□ 0.44
CCNF-203ENST00000564236 EBF1Q9UH73 591 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 CDV3Q9UKY7 258 aaKnown RBP17.8■□□□□ 0.44
CCNF-203ENST00000564236 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 TRAF3IP3Q9Y228 551 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 ANAPC1Q9H1A4 1944 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 RTN3O95197 1032 aaPredicted RBP17.79■□□□□ 0.44
CCNF-203ENST00000564236 RPN1P04843 607 aaKnown RBP17.79■□□□□ 0.44
CCNF-203ENST00000564236 OPRD1P41143 372 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 TUBP50607 506 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 MCCD1P59942 119 aaPredicted RBP17.79■□□□□ 0.44
CCNF-203ENST00000564236 ENPEPQ07075 957 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 TAF10Q12962 218 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 ZNF667Q5HYK9 610 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.79■□□□□ 0.44
CCNF-203ENST00000564236 ADGRG2Q8IZP9 1017 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 NUP93Q8N1F7 819 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 PDZD8Q8NEN9 1154 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 TAF4BQ92750 862 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 ZC3H10Q96K80 434 aaKnown RBP17.79■□□□□ 0.44
CCNF-203ENST00000564236 TNIP3Q96KP6 325 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 SLITRK1Q96PX8 696 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 LINC00597Q9H2U6 94 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 SMYD3Q9H7B4 428 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 COMMD8Q9NX08 183 aa17.79■□□□□ 0.44
CCNF-203ENST00000564236 PHACTR2O75167 634 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 RPP40O75818 363 aaKnown RBP17.78■□□□□ 0.44
CCNF-203ENST00000564236 ZDHHC11BP0C7U3 371 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 EIF2DP41214 584 aaKnown RBP17.78■□□□□ 0.44
CCNF-203ENST00000564236 BIRC3Q13489 604 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 SGSM1Q2NKQ1 1148 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 PRR23CQ6ZRP0 262 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 CACNA2D4Q7Z3S7 1137 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 DDX42Q86XP3 938 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCNF-203ENST00000564236 CRYBG2Q8N1P7 616 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 ACDQ96AP0 544 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 CSNK1G1Q9HCP0 422 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 ZDHHC9Q9Y397 364 aa17.78■□□□□ 0.44
CCNF-203ENST00000564236 ATP8B3O60423 1300 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 A0A0A0MRY4 1105 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 A0A1B0GVL5 298 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 CLDN5O00501 218 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 SLC9A3R1O14745 358 aaPredicted RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 SLC30A4O14863 429 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 RHOBTB3O94955 611 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 ASS1P00966 412 aaKnown RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 NR3C1P04150 777 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 CHRM1P11229 460 aaPredicted RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 YWHAQP27348 245 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 CDH8P55286 799 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 DLG4P78352 724 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 KRT85P78386 507 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 C1orf220Q5T0J3 134 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 CEP68Q76N32 757 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 UNC93AQ86WB7 457 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 FUKQ8N0W3 1084 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 RPLP0P6Q8NHW5 317 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 SMARCD1Q96GM5 515 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 ZFRQ96KR1 1074 aaKnown RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 DMAP1Q9NPF5 467 aaPredicted RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 PCDHGA5Q9Y5G8 931 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 CPQQ9Y646 472 aa17.77■□□□□ 0.44
CCNF-203ENST00000564236 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.77■□□□□ 0.44
CCNF-203ENST00000564236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.76■□□□□ 0.43
CCNF-203ENST00000564236 K7EQS6 105 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 EPN2O95208 641 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 KIF20AO95235 890 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 CYP17A1P05093 508 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 P4HA1P13674 534 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 LIMK1P53667 647 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 FILIP1Q7Z7B0 1213 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 USP33Q8TEY7 942 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 OTUB2Q96DC9 234 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
CCNF-203ENST00000564236 HELZP42694 1942 aaKnown RBP17.76■□□□□ 0.43
CCNF-203ENST00000564236 A0A1W2PQ27 194 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 A0A1W2PQ64 194 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 A0A1W2PQD8 194 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 E2F8A0AVK6 867 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 AXIN1O15169 862 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 APBB3O95704 486 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 SYKP43405 635 aa17.75■□□□□ 0.43
CCNF-203ENST00000564236 ASPAP45381 313 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms