RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 LDHAP00338 332 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ACADSP16219 412 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 BANPQ8N9N5 519 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 JDP2Q8WYK2 163 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 C17orf75Q9HAS0 396 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 KANSL3Q9P2N6 904 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 E2F8A0AVK6 867 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 KCNN4O15554 427 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 KRT37O76014 449 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 USP1O94782 785 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 CDH8P55286 799 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 TFAP2BQ92481 460 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 CYB561D2O14569 222 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 WDR46O15213 610 aaKnown RBP12.33□□□□□ -0.44
ABCA3-203ENST00000563623 AQP5P55064 265 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 LGSNQ5TDP6 509 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 IRGCQ6NXR0 463 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 NKD2Q969F2 451 aaPredicted RBP12.33□□□□□ -0.44
ABCA3-203ENST00000563623 E2F7Q96AV8 911 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 APOPT1Q96IL0 206 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 APOL6Q9BWW8 343 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 PPCSQ9HAB8 311 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
ABCA3-203ENST00000563623 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 NDE1Q9NXR1 346 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
ABCA3-203ENST00000563623 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 SNCAIPQ9Y6H5 919 aa12.33□□□□□ -0.44
ABCA3-203ENST00000563623 MAP3K13O43283 966 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 IL1R2P27930 398 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 PPP6R3Q5H9R7 873 aaPredicted RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 FAM102AQ5T9C2 384 aaPredicted RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 OR6B2Q6IFH4 312 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 RGS9BPQ6ZS82 235 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 POLIQ9UNA4 740 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 KDELR1P24390 212 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 BST1Q10588 318 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 CCNJLQ8IV13 435 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 POU5F2Q8N7G0 328 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 DCAKDQ8WVC6 231 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 WNK4Q96J92 1243 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ZNF302Q9NR11 478 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 MYH9P35579 1960 aaKnown RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 CCNG1P51959 295 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ISLR2Q6UXK2 745 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 SCUBE1Q8IWY4 988 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 UBA3Q8TBC4 463 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 NSUN6Q8TEA1 469 aaKnown RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
ABCA3-203ENST00000563623 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
ABCA3-203ENST00000563623 ZBED1O96006 694 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 APBA3O96018 575 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 TNNC2P02585 160 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 HSPA1LP34931 641 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 SERPINB6P35237 376 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 INO80B-WBP1J3KQ70 363 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 LRCH4O75427 683 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 PRKG1Q13976 671 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 C15orf39Q6ZRI6 1047 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 FBXO27Q8NI29 283 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 ZNF398Q8TD17 642 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 INO80BQ9C086 356 aaPredicted RBP12.31□□□□□ -0.44
ABCA3-203ENST00000563623 LNPEPQ9UIQ6 1025 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 E5RJQ4 531 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 M0QYV0 167 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 SNRPAP09012 282 aaKnown RBP12.31□□□□□ -0.44
ABCA3-203ENST00000563623 MIPP30301 263 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 NEK3P51956 506 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms