RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 SLC2A14Q8TDB8 520 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 FAM3CQ92520 227 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 TATDN2Q93075 761 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 HNRNPABQ99729 332 aaKnown RBP16.42■□□□□ 0.22
CCDC113-203ENST00000561517 SMOQ99835 787 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 GKN1Q9NS71 199 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 KRT82Q9NSB4 513 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 COMMD8Q9NX08 183 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 PTPRZ1P23471 2315 aaPredicted RBP16.41■□□□□ 0.22
CCDC113-203ENST00000561517 FAM92AA1XBS5 289 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 BEST1O76090 585 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 CKMP06732 381 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 HDCP19113 662 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 CD58P19256 250 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 YWHAQP27348 245 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 PDE6CP51160 858 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 USP4Q13107 963 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 PAK1Q13153 545 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 ZNF77Q15935 545 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 CAMK4Q16566 473 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 RALGPS2Q86X27 583 aaPredicted RBP16.41■□□□□ 0.22
CCDC113-203ENST00000561517 OVCA2Q8WZ82 227 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 ATOH1Q92858 354 aaPredicted RBP16.41■□□□□ 0.22
CCDC113-203ENST00000561517 SLITRK1Q96PX8 696 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 GTSE1Q9NYZ3 720 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 ARHGAP26Q9UNA1 814 aa16.41■□□□□ 0.22
CCDC113-203ENST00000561517 OLFM2O95897 454 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 OAS1P00973 400 aaKnown RBP16.4■□□□□ 0.22
CCDC113-203ENST00000561517 CTHP32929 405 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 FMO5P49326 533 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 KPNA1P52294 538 aaPredicted RBP16.4■□□□□ 0.22
CCDC113-203ENST00000561517 SLC5A3P53794 718 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
CCDC113-203ENST00000561517 STX17P56962 302 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 TNK2Q07912 1038 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 ITPRIPL2Q3MIP1 535 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 CCDC40Q4G0X9 1142 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 C1orf210Q8IVY1 113 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 SCAMP5Q8TAC9 235 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 ARID3AQ99856 593 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 FAM86C1Q9NVL1 165 aa16.4■□□□□ 0.22
CCDC113-203ENST00000561517 NDRG2Q9UN36 371 aaKnown RBP16.4■□□□□ 0.22
CCDC113-203ENST00000561517 SPECC1L-ADORA2AF8WAN1 911 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 GNA14O95837 355 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 FAM200BP0CF97 657 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 ADORA2BP29275 332 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 NBL1P41271 181 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 SOX9P48436 509 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 MAP3K7CLP57077 242 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 SLC7A9P82251 487 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 MTF1Q14872 753 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 SNX30Q5VWJ9 437 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 TRIM59Q8IWR1 403 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 SH3RF2Q8TEC5 729 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 RNF38Q9H0F5 515 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 PNPLA8Q9NP80 782 aa16.39■□□□□ 0.21
CCDC113-203ENST00000561517 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.21
CCDC113-203ENST00000561517 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 P4HA2O15460 535 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 ZDHHC11BP0C7U3 371 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 CHRNB1P11230 501 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 RAD23BP54727 409 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 ZXDBP98169 803 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 IFRD2Q12894 506 aaPredicted RBP16.38■□□□□ 0.21
CCDC113-203ENST00000561517 CUL2Q13617 745 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 RUNX3Q13761 415 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 PDGFRLQ15198 375 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 ZNF394Q53GI3 561 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
CCDC113-203ENST00000561517 TRIM68Q6AZZ1 485 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 CC2D1AQ6P1N0 951 aaPredicted RBP16.38■□□□□ 0.21
CCDC113-203ENST00000561517 TXNDC11Q6PKC3 985 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
CCDC113-203ENST00000561517 KIAA1958Q8N8K9 716 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 SLC4A11Q8NBS3 891 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 TTC8Q8TAM2 541 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 OSCP1Q8WVF1 389 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
CCDC113-203ENST00000561517 CHRDQ9H2X0 955 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 EBF3Q9H4W6 596 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
CCDC113-203ENST00000561517 OTOL1A6NHN0 477 aaPredicted RBP16.37■□□□□ 0.21
CCDC113-203ENST00000561517 MRE11P49959 708 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 TUBP50607 506 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 ARHGAP17Q68EM7 881 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms