RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	CHD6	Q8TD26	2715 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	SPTBN2	O15020	2390 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395		C9IYK1	514 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395		M0QYV0	167 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	PDE2A	O00408	941 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	PODXL	O00592	558 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	DDX3Y	O15523	660 aa	Known RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	HUS1	O60921	280 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	FGFR1	P11362	822 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	WARS	P23381	471 aa	Known RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	CXCR5	P32302	372 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	RPL9	P32969	192 aa	Known RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	BMPR1A	P36894	532 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	DNA2	P51530	1060 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	GSC	P56915	257 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	FOXK1	P85037	733 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	GRIK3	Q13003	919 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	MESD	Q14696	234 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	NAA30	Q147X3	362 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ELF2	Q15723	593 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	PTPN20	Q4JDL3	420 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	C2CD6	Q53TS8	623 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ARHGAP17	Q68EM7	881 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	PLEKHA7	Q6IQ23	1121 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	LLGL2	Q6P1M3	1020 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	LCLAT1	Q6UWP7	414 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	FAM43B	Q6ZT52	329 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	SLC24A5	Q71RS6	500 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	DPH6	Q7L8W6	267 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ADGRD2	Q7Z7M1	963 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	RTN4RL1	Q86UN2	441 aa	Predicted RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ADGRF2	Q8IZF7	708 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	TOP6BL	Q8N6T0	577 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	TMEM105	Q8N8V8	129 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	RNF169	Q8NCN4	708 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	APPL2	Q8NEU8	664 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	UBE2Q2	Q8WVN8	375 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	SEPT8	Q92599	483 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	PBK	Q96KB5	322 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	BTBD6	Q96KE9	485 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	HEXIM2	Q96MH2	286 aa	Known RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	FTHL17	Q9BXU8	183 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	TRIM7	Q9C029	511 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	SNX25	Q9H3E2	840 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	MRPL47	Q9HD33	250 aa	Known RBP	7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	RNF14	Q9UBS8	474 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	CYTH4	Q9UIA0	394 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ANAPC7	Q9UJX3	599 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	ALG6	Q9Y672	507 aa		7.94	□□□□□ -1.14
TPM1-231	ENST00000561395	USP24	Q9UPU5	2620 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	TCRBV5S1A1T	A0A578	114 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	TMEM110-MUSTN1	A8MSY1	372 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395		A8MXQ7	604 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	MIF4GD	A9UHW6	222 aa	Known RBP	7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CYB561D2	O14569	222 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	KCNK3	O14649	394 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	GLP2R	O95838	553 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	EOMES	O95936	686 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	FAM163B	P0C2L3	166 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	SRGAP2B	P0DMP2	458 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	COMT	P21964	271 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	GNL1	P36915	607 aa	Predicted RBP	7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	GPD2	P43304	727 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	GABRB2	P47870	512 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	AARS	P49588	968 aa	Known RBP eCLIP	7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CLCNKB	P51801	687 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	TUBB4B	P68371	445 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	FAM189B	P81408	668 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	ITIH3	Q06033	890 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	PDCL	Q13371	301 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	MAMLD1	Q13495	774 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CAMK1	Q14012	370 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	UPP1	Q16831	310 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	ERCC6L	Q2NKX8	1250 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	GOLGA7B	Q2TAP0	167 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CFAP221	Q4G0U5	840 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	TEX35	Q5T0J7	233 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CCDC181	Q5TID7	509 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	DNAJC24	Q6P3W2	148 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	PHLDB2	Q86SQ0	1253 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	ACOT1	Q86TX2	421 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	OSTM1	Q86WC4	334 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	ERICH1	Q86X53	443 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CRYBG2	Q8N1P7	616 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	PDCL2	Q8N4E4	241 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	EFHB	Q8N7U6	833 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	C12orf29	Q8N999	325 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	MSANTD4	Q8NCY6	345 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	OR6B3	Q8NGW1	331 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	UBXN4	Q92575	508 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	RABGGTA	Q92696	567 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	APBB2	Q92870	758 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	CD101	Q93033	1021 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	SENP8	Q96LD8	212 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	UROC1	Q96N76	676 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	DNAI2	Q9GZS0	605 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	KDM4C	Q9H3R0	1056 aa		7.93	□□□□□ -1.14
TPM1-231	ENST00000561395	PARVA	Q9NVD7	372 aa		7.93	□□□□□ -1.14

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