RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TBC1D17Q9HA65 648 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 TDP1Q9NUW8 608 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 THG1LQ9NWX6 298 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 GMIPQ9P107 970 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 WNT16Q9UBV4 365 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 HESX1Q9UBX0 185 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 NDRG2Q9UN36 371 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 CCL26Q9Y258 94 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 FAM170AA1A519 330 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 KRBA1A5PL33 1030 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 P4HA2O15460 535 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 TADA3O75528 432 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 IRF1P10914 325 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 BRD2P25440 801 aaKnown RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 DDX6P26196 483 aaKnown RBP eCLIP10.7□□□□□ -0.7
HERC1-212ENST00000561348 VCPP55072 806 aaKnown RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 MARSP56192 900 aaKnown RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 TYRO3Q06418 890 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 MAN2A1Q16706 1144 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 EXOC3L4Q17RC7 722 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 VWA3BQ502W6 1294 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 CLEC20AQ6ZU45 233 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 GPRIN1Q7Z2K8 1008 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 IRF2BP1Q8IU81 584 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 MFSD6LQ8IWD5 586 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 CELF5Q8N6W0 485 aaKnown RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 RBBP8NLQ8NC74 664 aaPredicted RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 DEPDC1BQ8WUY9 529 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 IRF7Q92985 503 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 USP13Q92995 863 aaPredicted RBP10.7□□□□□ -0.7
HERC1-212ENST00000561348 E2F7Q96AV8 911 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 SHDQ96IW2 340 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 MYRFLQ96LU7 910 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 FOXQ1Q9C009 403 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 NDST4Q9H3R1 872 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 GKN1Q9NS71 199 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 FANCLQ9NW38 375 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 TSPAN16Q9UKR8 245 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 MUC3AQ02505 3323 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 PTPRDP23468 1912 aa10.7□□□□□ -0.7
HERC1-212ENST00000561348 NCANO14594 1321 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 M0QYV0 167 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 DCNP07585 359 aaKnown RBP10.69□□□□□ -0.7
HERC1-212ENST00000561348 LCP1P13796 627 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 NPR3P17342 541 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 SOX9P48436 509 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 RGS7P49802 495 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 MFAP3P55082 362 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 TNK2Q07912 1038 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 RAPGEF1Q13905 1077 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 MLF2Q15773 248 aaPredicted RBP10.69□□□□□ -0.7
HERC1-212ENST00000561348 ANO6Q4KMQ2 910 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 TCP11X2Q5H9J9 407 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 TRIM68Q6AZZ1 485 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 AOPEPQ8N6M6 819 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 ZMIZ2Q8NF64 920 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 ANKRD20A12PQ8NF67 263 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 SH3RF2Q8TEC5 729 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 LRRC3BQ96PB8 259 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 DUSP16Q9BY84 665 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
HERC1-212ENST00000561348 FBXO44Q9H4M3 255 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 EBF3Q9H4W6 596 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 CCSER2Q9H7U1 834 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 SLC2A4RGQ9NR83 387 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 GTSE1Q9NYZ3 720 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 NUDT5Q9UKK9 219 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 CPQQ9Y646 472 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 PIAS3Q9Y6X2 628 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 TRIOO75962 3097 aa10.69□□□□□ -0.7
HERC1-212ENST00000561348 SYCE3A1L190 88 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 ZNF840PA6NDX5 716 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 FAM170BA6NMN3 283 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 RNF225M0QZC1 329 aaPredicted RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 CYP26A1O43174 497 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 THAP12O43422 761 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 PI15O43692 258 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 LETM1O95202 739 aaPredicted RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 VDRP11473 427 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 PON1P27169 355 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 AVPR2P30518 371 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 IFNAR2P48551 515 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 PDE6CP51160 858 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 MYL5Q02045 173 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 PDE4CQ08493 712 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 ARHGAP29Q52LW3 1261 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 HECTD3Q5T447 861 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 TRIM65Q6PJ69 517 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 RBM43Q6ZSC3 357 aaKnown RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 PIGZQ86VD9 579 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 PDZD8Q8NEN9 1154 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 NDRG1Q92597 394 aaKnown RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 KREMEN1Q96MU8 473 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms