RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KAT5Q92993 513 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 FAM149B1Q96BN6 582 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 ZNF707Q96C28 371 aaPredicted RBP11.29□□□□□ -0.6
TPM1-229ENST00000561242 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 MFSD1Q9H3U5 465 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 KIF9Q9HAQ2 790 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 OLA1Q9NTK5 396 aaKnown RBP11.29□□□□□ -0.6
TPM1-229ENST00000561242 HMGXB4Q9UGU5 601 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 CHORDC1Q9UHD1 332 aaPredicted RBP11.29□□□□□ -0.6
TPM1-229ENST00000561242 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 FHOD1Q9Y613 1164 aa11.29□□□□□ -0.6
TPM1-229ENST00000561242 SLC9A3R1O14745 358 aaPredicted RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 ZNF263O14978 683 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 ZBED1O96006 694 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 BMP1P13497 986 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 ATF6P18850 670 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 GBP1P32455 592 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 NSFP46459 744 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 PDE4CQ08493 712 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 KLHL30Q0D2K2 578 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 MTMR3Q13615 1198 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 TAF3Q5VWG9 929 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 CLEC20AQ6ZU45 233 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM1-229ENST00000561242 PIGZQ86VD9 579 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 ERICH1Q86X53 443 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 CELF5Q8N6W0 485 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 SMARCD2Q92925 531 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 RNF34Q969K3 372 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 TRMT61BQ9BVS5 477 aaKnown RBP11.28□□□□□ -0.6
TPM1-229ENST00000561242 TMEM51Q9NW97 253 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM1-229ENST00000561242 CITO14578 2027 aa11.28□□□□□ -0.6
TPM1-229ENST00000561242 F8VZ95 297 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 O00370 1275 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.61
TPM1-229ENST00000561242 CYP11B1P15538 503 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 GJA1P17302 382 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 RGS7P49802 495 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 KPNA1P52294 538 aaPredicted RBP11.27□□□□□ -0.61
TPM1-229ENST00000561242 COG7P83436 770 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 CYP4F8P98187 520 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 TDGQ13569 410 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 MEA1Q16626 185 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 PASD1Q8IV76 773 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 ITFG1Q8TB96 612 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 SHDQ96IW2 340 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 MYRFLQ96LU7 910 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
TPM1-229ENST00000561242 PKMYT1Q99640 499 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 SMOQ99835 787 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 XPO4Q9C0E2 1151 aaKnown RBP11.27□□□□□ -0.61
TPM1-229ENST00000561242 LHX5Q9H2C1 402 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 LUC7LQ9NQ29 371 aaKnown RBP11.27□□□□□ -0.61
TPM1-229ENST00000561242 CNGB3Q9NQW8 809 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 ABCC13Q9NSE7 274 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 EPS15L1Q9UBC2 864 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 DNMT3LQ9UJW3 386 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 SCML2Q9UQR0 700 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
TPM1-229ENST00000561242 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
TPM1-229ENST00000561242 GOLGA6L3A6NEY3 463 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 C2CD4DB7Z1M9 353 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 TEX33O43247 280 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 RARGP13631 454 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 CEBPBP17676 345 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 IFNAR2P48551 515 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 KLK7P49862 253 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 YWHAGP61981 247 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPM1-229ENST00000561242 ZBED6P86452 979 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 PREPLQ4J6C6 727 aaPredicted RBP11.26□□□□□ -0.61
TPM1-229ENST00000561242 TXNDC8Q6A555 127 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 SLC47A2Q86VL8 602 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 ZDHHC17Q8IUH5 632 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 CNGA4Q8IV77 575 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 ARID3BQ8IVW6 561 aaPredicted RBP11.26□□□□□ -0.61
TPM1-229ENST00000561242 NPAS3Q8IXF0 933 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms