RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 CRYABP02511 175 aaKnown RBP4.17□□□□□ -1.74
USP8-216ENST00000561206 PRKCBP05771 671 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 POU2F2P09086 479 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 TGFB3P10600 412 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 FPR3P25089 353 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 HILS1P60008 231 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 ZNF268Q14587 947 aaPredicted RBP4.17□□□□□ -1.74
USP8-216ENST00000561206 CYP1B1Q16678 543 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 AMOTQ4VCS5 1084 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 L1TD1Q5T7N2 865 aaKnown RBP4.17□□□□□ -1.74
USP8-216ENST00000561206 DEPDC1Q5TB30 811 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 SLC15A3Q8IY34 581 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 CELF5Q8N6W0 485 aaKnown RBP4.17□□□□□ -1.74
USP8-216ENST00000561206 OSCP1Q8WVF1 389 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 CAMK1GQ96NX5 476 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 FOXP1Q9H334 677 aaPredicted RBP4.17□□□□□ -1.74
USP8-216ENST00000561206 SPEF1Q9Y4P9 236 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 TRIP12Q14669 1992 aaPredicted RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 hCG_1984214I3L0E3 225 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 LRPAP1P30533 357 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 SATB1Q01826 763 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 RNASE12Q5GAN4 147 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 SERPINA13PQ6UXR4 307 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 BCDIN3DQ7Z5W3 292 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 CATIPQ7Z7H3 387 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 MTFMTQ96DP5 389 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 SMAD5Q99717 465 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 ASPSCR1Q9BZE9 553 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 ASIC5Q9NY37 505 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 MRPS17Q9Y2R5 130 aaKnown RBP4.16□□□□□ -1.74
USP8-216ENST00000561206 MED16Q9Y2X0 877 aa4.16□□□□□ -1.74
USP8-216ENST00000561206 CYP2C9P11712 490 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 ADORA2AP29274 412 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 KCNJ5P48544 419 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 WNT3P56703 355 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 E2F1Q01094 437 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 AMPD3Q01432 767 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 FAM187BQ17R55 369 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 CCDC157Q569K6 752 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 KHDC1LQ5JSQ8 128 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 RNF187Q5TA31 235 aaPredicted RBP4.15□□□□□ -1.75
USP8-216ENST00000561206 CAND1Q86VP6 1230 aaKnown RBP4.15□□□□□ -1.75
USP8-216ENST00000561206 TMPRSS12Q86WS5 348 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 RFX6Q8HWS3 928 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 PELI3Q8N2H9 469 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 ZNF398Q8TD17 642 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 MVB12AQ96EY5 273 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 CDK5RAP3Q96JB5 506 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 FYTTD1Q96QD9 318 aaKnown RBP4.15□□□□□ -1.75
USP8-216ENST00000561206 MMS19Q96T76 1030 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 MESP1Q9BRJ9 268 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 EFHD1Q9BUP0 239 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 POT1Q9NUX5 634 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
USP8-216ENST00000561206 TMEM232C9JQI7 657 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 DSCR3O14972 297 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 SNUPNO95149 360 aaKnown RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 MYCLP12524 364 aaPredicted RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 SLC11A2P49281 568 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 ALDH5A1P51649 535 aaPredicted RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 UCP3P55916 312 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 ZIK1Q3SY52 487 aaPredicted RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 DPY19L3Q6ZPD9 716 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 ZNF280BQ86YH2 543 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 IZUMO1Q8IYV9 350 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 ABRAQ8N0Z2 381 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 CUL5Q93034 780 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 RSPRY1Q96DX4 576 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 FAM84BQ96KN1 310 aaPredicted RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 PRR25Q96S07 402 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 SARS2Q9NP81 518 aaKnown RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 TRMT13Q9NUP7 481 aaKnown RBP4.14□□□□□ -1.75
USP8-216ENST00000561206 TFCP2L1Q9NZI6 479 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 PCDHA6Q9UN73 950 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 TMX2Q9Y320 296 aa4.14□□□□□ -1.75
USP8-216ENST00000561206 BTBD19C9JJ37 291 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 AP4M1O00189 453 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 SLC28A2O43868 658 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 VNN1O95497 513 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 IL33O95760 270 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 A1BGP04217 495 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 PSG1P11464 419 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 KCNA3P22001 575 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 CDKN2AP42771 156 aaKnown RBP4.13□□□□□ -1.75
USP8-216ENST00000561206 DGKEP52429 567 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 EVA1CP58658 441 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 GAS2L3Q86XJ1 694 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 ADAMTS18Q8TE60 1221 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 PNISRQ8TF01 805 aaKnown RBP4.13□□□□□ -1.75
USP8-216ENST00000561206 MRGPRX1Q96LB2 322 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 DPCDQ9BVM2 203 aaPredicted RBP4.13□□□□□ -1.75
USP8-216ENST00000561206 GJB4Q9NTQ9 266 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 STXBP5LQ9Y2K9 1186 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms