RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 RNF38Q9H0F5 515 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 CAPN10Q9HC96 672 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 TBC1D14Q9P2M4 693 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 OPHN1O60890 802 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 ADAM23O75077 832 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 BMP15O95972 392 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 ADH1CP00326 375 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 ITPKAP23677 461 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 GRIK1P39086 918 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 MYO1EQ12965 1108 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 RESTQ13127 1097 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 SLC14A1Q13336 389 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 ARMCX6Q7L4S7 300 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 TRMT11Q7Z4G4 463 aaKnown RBP19.81■□□□□ 0.76
TPM1-226ENST00000560959 RAB44Q7Z6P3 723 aaPredicted RBP19.81■□□□□ 0.76
TPM1-226ENST00000560959 FRMD1Q8N878 549 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 HMGB4Q8WW32 186 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 OTUB2Q96DC9 234 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 ACCSQ96QU6 501 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 RBAKQ9NYW8 714 aaPredicted RBP19.81■□□□□ 0.76
TPM1-226ENST00000560959 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 NBEAQ8NFP9 2946 aa19.81■□□□□ 0.76
TPM1-226ENST00000560959 PTPRDP23468 1912 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 ANAPC1Q9H1A4 1944 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 TRIM66O15016 1216 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 OAS1P00973 400 aaKnown RBP19.8■□□□□ 0.76
TPM1-226ENST00000560959 USP46P62068 366 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 CCDC142Q17RM4 750 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
TPM1-226ENST00000560959 EMC10Q5UCC4 262 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 C8orf48Q96LL4 319 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 DUSP9Q99956 384 aaKnown RBP19.8■□□□□ 0.76
TPM1-226ENST00000560959 SYT15Q9BQS2 421 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 IKZF4Q9H2S9 585 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 ARHGEF4Q9NR80 690 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 DNAAF2Q9NVR5 837 aaKnown RBP19.8■□□□□ 0.76
TPM1-226ENST00000560959 CIZ1Q9ULV3 898 aaPredicted RBP19.8■□□□□ 0.76
TPM1-226ENST00000560959 CPQQ9Y646 472 aa19.8■□□□□ 0.76
TPM1-226ENST00000560959 CACNA1EQ15878 2313 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 ATP2C2O75185 946 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 SEC24BO95487 1268 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 CFIP05156 583 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 KRT19P08727 400 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 FAM163BP0C2L3 166 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 BDNFP23560 247 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 LMO2P25791 158 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 ANXA13P27216 316 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 MESP2Q0VG99 397 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 NUDT18Q6ZVK8 323 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 SFR1Q86XK3 245 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 SFTPA1Q8IWL2 248 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 PGBD3Q8N328 593 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 PHTF2Q8N3S3 785 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 CHCHD4Q8N4Q1 142 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 RASSF8Q8NHQ8 419 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 KBTBD7Q8WVZ9 684 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 MYLPFQ96A32 169 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 MRPL44Q9H9J2 332 aaKnown RBP19.79■□□□□ 0.76
TPM1-226ENST00000560959 CRTAC1Q9NQ79 661 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 R3HCC1Q9Y3T6 440 aaKnown RBP19.79■□□□□ 0.76
TPM1-226ENST00000560959 PCDHB13Q9Y5F0 798 aa19.79■□□□□ 0.76
TPM1-226ENST00000560959 TCRBV21S2A2A0A5A6 115 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 E2F8A0AVK6 867 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 ARHGAP33O14559 1287 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 HCRTO43612 131 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 SYPP08247 313 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 ADH5P11766 374 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 CD59P13987 128 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 GAP43P17677 238 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 RPL6Q02878 288 aaKnown RBP19.78■□□□□ 0.76
TPM1-226ENST00000560959 GAD2Q05329 585 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 KCNA1Q09470 495 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 SCARA3Q6AZY7 606 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 C12orf40Q86WS4 652 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 MYCBPAPQ8TBZ2 947 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 SAAL1Q96ER3 474 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 GTPBP2Q9BX10 602 aaKnown RBP19.78■□□□□ 0.76
TPM1-226ENST00000560959 GPSM3Q9Y4H4 160 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 GON4LQ3T8J9 2241 aa19.78■□□□□ 0.76
TPM1-226ENST00000560959 TNRC6BQ9UPQ9 1833 aaKnown RBP19.77■□□□□ 0.76
TPM1-226ENST00000560959 PLXND1Q9Y4D7 1925 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 TBC1D3BA6NDS4 549 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 KIAA0391O15091 583 aaKnown RBP19.77■□□□□ 0.76
TPM1-226ENST00000560959 ZNF217O75362 1048 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 TMEM191BP0C7N4 346 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 WARSP23381 471 aaKnown RBP19.77■□□□□ 0.76
TPM1-226ENST00000560959 PI4KAP42356 2102 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 ZNF33AQ06730 810 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 ALCAMQ13740 583 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 TDRD10Q5VZ19 366 aaKnown RBP19.77■□□□□ 0.76
TPM1-226ENST00000560959 ETFBKMTQ8IXQ9 262 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 MINDY1Q8N5J2 469 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 ZSWIM2Q8NEG5 633 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 PCED1BQ96HM7 432 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 HPDLQ96IR7 371 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 ANKRD36BP1Q96IX9 119 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 SLITRK1Q96PX8 696 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 KIF2CQ99661 725 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 MTMR12Q9C0I1 747 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 PDE11AQ9HCR9 933 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms