RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 STN1Q9H668 368 aaKnown RBP8.96□□□□□ -0.98
CCDC33-209ENST00000560565 KIAA1586Q9HCI6 787 aa8.96□□□□□ -0.98
CCDC33-209ENST00000560565 PRDM5Q9NQX1 630 aaPredicted RBP8.96□□□□□ -0.98
CCDC33-209ENST00000560565 DDX56Q9NY93 547 aaKnown RBP8.96□□□□□ -0.98
CCDC33-209ENST00000560565 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
CCDC33-209ENST00000560565 TMCO1Q9UM00 188 aa8.96□□□□□ -0.98
CCDC33-209ENST00000560565 DRG1Q9Y295 367 aaKnown RBP8.96□□□□□ -0.98
CCDC33-209ENST00000560565 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
CCDC33-209ENST00000560565 IKBKGQ9Y6K9 419 aa8.96□□□□□ -0.98
CCDC33-209ENST00000560565 EMSYQ7Z589 1322 aa8.96□□□□□ -0.98
CCDC33-209ENST00000560565 FOXN3O00409 490 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 KLF11O14901 512 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 LGR5O75473 907 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ESRRAP11474 423 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 SP100P23497 879 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 BMP8BP34820 402 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 PTPN7P35236 360 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 MAGEA10P43363 369 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 SERPINB4P48594 390 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 CPT1AP50416 773 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GEMIN4P57678 1058 aaKnown RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 DSG1Q02413 1049 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GCNT1Q02742 428 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 DEUP1Q05D60 604 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 LAMB3Q13751 1172 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 LAMC2Q13753 1193 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 TMED2Q15363 201 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 EPC2Q52LR7 807 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 CELF3Q5SZQ8 465 aaKnown RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 SNX30Q5VWJ9 437 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ATG16L1Q676U5 607 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 CXCL17Q6UXB2 119 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 LRRC74BQ6ZQY2 392 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 NLRP9Q7RTR0 991 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 PLPPR4Q7Z2D5 763 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ANKRD33Q7Z3H0 272 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ARHGAP22Q7Z5H3 698 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 NET1Q7Z628 596 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ADAT2Q7Z6V5 191 aaKnown RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 CHSY1Q86X52 802 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 TMPRSS6Q8IU80 811 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 RCOR2Q8IZ40 523 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ATP11CQ8NB49 1132 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 MCPH1Q8NEM0 835 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 OR6J1Q8NGC5 347 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 SHC3Q92529 594 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 MAML1Q92585 1016 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 PRCCQ92733 491 aaPredicted RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 PTPRN2Q92932 1015 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 KCNN1Q92952 543 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 RMDN2Q96LZ7 410 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 TOX2Q96NM4 488 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 RBM15Q96T37 977 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GORASP1Q9BQQ3 440 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 DDX23Q9BUQ8 820 aaKnown RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GPR88Q9GZN0 384 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF302Q9NR11 478 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 NRBP2Q9NSY0 501 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 DDX43Q9NXZ2 648 aaKnown RBP8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GABBR1Q9UBS5 961 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 COG5Q9UP83 839 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 EFR3BQ9Y2G0 817 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 GMEB1Q9Y692 573 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 CITO14578 2027 aa8.95□□□□□ -0.98
CCDC33-209ENST00000560565 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DPPA5A6NC42 116 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 TMEM110-MUSTN1A8MSY1 372 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 I3L4J1 428 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ARVCFO00192 962 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DNALI1O14645 258 aaPredicted RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CLIC2O15247 247 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 GAS2O43903 313 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DGAT1O75907 488 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ARIH2O95376 493 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 GH1P01241 217 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 OATP04181 439 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CLTBP09497 229 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DLATP10515 647 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 RFC5P40937 340 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 NSFP46459 744 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CDK7P50613 346 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CYP2J2P51589 502 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CASP5P51878 434 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 RAP1GDS1P52306 607 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ARFIP2P53365 341 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ARL4CP56559 192 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 SP2Q02086 613 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 RCN2Q14257 317 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 SIX1Q15475 284 aaPredicted RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ADRM1Q16186 407 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 LY6KQ17RY6 165 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CLEC16AQ2KHT3 1053 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 TAF1BQ53T94 588 aaPredicted RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CLNKQ7Z7G1 428 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DHX37Q8IY37 1157 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 FAM81AQ8TBF8 368 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms