RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CSGALNACT2Q8N6G5 542 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 TOP6BLQ8N6T0 577 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 LRRC52Q8N7C0 313 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 SPRYD3Q8NCJ5 442 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 SPATA17Q96L03 361 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 PKMYT1Q99640 499 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 STYXL1Q9Y6J8 313 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 NBEAQ8NFP9 2946 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 ADH5P11766 374 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 KIR2DL1P43626 348 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 PPP3CCP48454 512 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 SLC7A9P82251 487 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 MAPRE1Q15691 268 aaKnown RBP19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 COL28A1Q2UY09 1125 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 SOWAHCQ53LP3 525 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 BTBD8Q5XKL5 378 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 VSTM1Q6UX27 236 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 CRELD2Q6UXH1 353 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 DDX42Q86XP3 938 aaKnown RBP eCLIP19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 SFTPA1Q8IWL2 248 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 AK8Q96MA6 479 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 CEP295NLQ96MC4 621 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 FAM213AQ9BRX8 229 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 CAPN10Q9HC96 672 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 ZDHHC4Q9NPG8 344 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 SMPD4Q9NXE4 827 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 ITGA11Q9UKX5 1188 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 KIF3AQ9Y496 699 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 CPQQ9Y646 472 aa19.05■□□□□ 0.64
TSPAN3-208ENST00000560514 TBC1D3BA6NDS4 549 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 SCAMP3O14828 347 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 PLCG1P19174 1290 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 RBP5P82980 135 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 ZXDBP98169 803 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 CYP27A1Q02318 531 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 SLC14A1Q13336 389 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 MCM6Q14566 821 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 OSTM1Q86WC4 334 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 C1orf127Q8N9H9 656 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 KRI1Q8N9T8 703 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 DNAAF2Q9NVR5 837 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 GDAP2Q9NXN4 497 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 TBC1D14Q9P2M4 693 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 EXOC7Q9UPT5 735 aa19.04■□□□□ 0.64
TSPAN3-208ENST00000560514 FREM2Q5SZK8 3169 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 A0A0A0MRY4 1105 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 TRIM66O15016 1216 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 SH3BP5O60239 455 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 ADAM23O75077 832 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 CD59P13987 128 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 BDNFP23560 247 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 MYO1EQ12965 1108 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 CCDC142Q17RM4 750 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 PLEKHG6Q3KR16 790 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 FAM171BQ6P995 826 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 RHBDF2Q6PJF5 856 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 RGL4Q8IZJ4 473 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 ZNF513Q8N8E2 541 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 OR2I1PQ8NGU4 316 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 KCNV2Q8TDN2 545 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 ADAMTS14Q8WXS8 1223 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 RAD54LQ92698 747 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 HVCN1Q96D96 273 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 FIZ1Q96SL8 496 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 SYT15Q9BQS2 421 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 ST6GALNAC4Q9H4F1 302 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 CFAP97Q9P2B7 532 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 CDH9Q9ULB4 789 aa19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 APOBEC2Q9Y235 224 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-208ENST00000560514 A0A1W2PQD8 194 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 ZNF840PA6NDX5 716 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 GABRDO14764 452 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 HCRTO43612 131 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 ZNF217O75362 1048 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 LDHAP00338 332 aaKnown RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 TMEM191BP0C7N4 346 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 FTH1P19P0C7X4 201 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 MBL2P11226 248 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 GNSP15586 552 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 PSMC1P62191 440 aaKnown RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 GAD2Q05329 585 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 MESP2Q0VG99 397 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 SYCP2LQ5T4T6 812 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 C12orf40Q86WS4 652 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 BRSK2Q8IWQ3 736 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 NOC3LQ8WTT2 800 aaKnown RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 CAMK1GQ96NX5 476 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 SLITRK1Q96PX8 696 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 RNF38Q9H0F5 515 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 FAM124BQ9H5Z6 455 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 RBAKQ9NYW8 714 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 CALCOCO1Q9P1Z2 691 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 SUSD2Q9UGT4 822 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 PCDH15Q96QU1 1955 aa19.02■□□□□ 0.64
TSPAN3-208ENST00000560514 ATP2C2O75185 946 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 NDUFS2O75306 463 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 CAPNS1P04632 268 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 HOXB2P14652 356 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms