RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 OLFML1Q6UWY5 402 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 DDX53Q86TM3 631 aaKnown RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 LRRTM3Q86VH5 581 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 HERC6Q8IVU3 1022 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SCUBE3Q8IX30 993 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SIX6OS1Q8N1H7 587 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CEP112Q8N8E3 955 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SP7Q8TDD2 431 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CD101Q93033 1021 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CEP295NLQ96MC4 621 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SMOQ99835 787 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 HERC2P3Q9BVR0 1158 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CARD9Q9H257 536 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CNGB3Q9NQW8 809 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 METTL5Q9NRN9 209 aaKnown RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TMLHEQ9NVH6 421 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 HSFX1Q9UBD0 423 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 MTRRQ9UBK8 725 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TJP2Q9UDY2 1190 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CHORDC1Q9UHD1 332 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 MYO18AQ92614 2054 aaKnown RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 C2CD4BA6NLJ0 364 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 HHLA1C9JL84 531 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 DPYSL4O14531 572 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 KCNK3O14649 394 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 RIOK3O14730 519 aaKnown RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PSTPIP1O43586 416 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 NCK2O43639 380 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TLL1O43897 1013 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 HSF2BPO75031 334 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 RNF8O76064 485 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 CPB1P15086 417 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PDGFRAP16234 1089 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 ATP2A2P16615 1042 aaKnown RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 GPD1P21695 349 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PAFAH1B1P43034 410 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PTPN9P43378 593 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 GLUD2P49448 558 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TKTL1P51854 596 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 EPHB4P54760 987 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 MRPS5P82675 430 aaKnown RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 DSG1Q02413 1049 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 ADIGQ0VDE8 80 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PSMD5Q16401 504 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 LRRC38Q5VT99 294 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TAS1R1Q7RTX1 841 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 ZNF572Q7Z3I7 529 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 POLNQ7Z5Q5 900 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TMCO2Q7Z6W1 182 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PHLDB2Q86SQ0 1253 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 RHOT1Q8IXI2 618 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 MNS1Q8NEH6 495 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 ZMIZ2Q8NF64 920 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 BCL7CQ8WUZ0 217 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 IRGQQ8WZA9 623 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 BTBD6Q96KE9 485 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 C8orf48Q96LL4 319 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM209Q96SK2 561 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 KCNK16Q96T55 309 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 CNPY3Q9BT09 278 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TRIM7Q9C029 511 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 GOLPH3Q9H4A6 298 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM51Q9NW97 253 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 COMMD8Q9NX08 183 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 RRN3Q9NYV6 651 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 TTC7AQ9ULT0 858 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 MAFFQ9ULX9 164 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PACSIN2Q9UNF0 486 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-209ENST00000560463 CHD5Q8TDI0 1954 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 PDE4DIPQ5VU43 2346 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 MYO7AQ13402 2215 aa9.04□□□□□ -0.96
TRAF3-209ENST00000560463 LAMA2P24043 3122 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 C2orf16Q68DN1 1984 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 MTMR11A4FU01 709 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 DDX3YO15523 660 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 GABBR2O75899 941 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 ZBED1O96006 694 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 URODP06132 367 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 KRT7P08729 469 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CYP2F1P24903 491 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 PSMA2P25787 234 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 SDC4P31431 198 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 PCK1P35558 622 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 GRIK1P39086 918 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 PEX5P50542 639 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CACNA2D1P54289 1103 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 RWDD2BP57060 319 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 DAOAP59103 153 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 ITIH3Q06033 890 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms