RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SEC24CP53992 1094 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 CDH8P55286 799 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 ARL4CP56559 192 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 KYNUQ16719 465 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 PKDCCQ504Y2 493 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 XKR4Q5GH76 650 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 MORN1Q5T089 497 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 TMEM63BQ5T3F8 832 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 FAM102AQ5T9C2 384 aaPredicted RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 KAZNQ674X7 775 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 TTC19Q6DKK2 380 aaPredicted RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 ARHGEF18Q6ZSZ5 1173 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 CATSPER4Q7RTX7 472 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 CPLX4Q7Z7G2 160 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 TMEM110Q86TL2 294 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 OTUD6BQ8N6M0 293 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 ANKS4BQ8N8V4 417 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 SGSM3Q96HU1 749 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 CPB2Q96IY4 423 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 TWNKQ96RR1 684 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 SELENOSQ9BQE4 189 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 SSU72Q9NP77 194 aaKnown RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 GDAP2Q9NXN4 497 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 HESX1Q9UBX0 185 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 USP18Q9UMW8 372 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 SCN1AP35498 2009 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 GOLGA6L7A0A1B0GV03 622 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 SGK1O00141 431 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 MDM4O15151 490 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 PRPSAP2O60256 369 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 CST8O60676 142 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 KPNA6O60684 536 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 GPR32O75388 356 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 GNAT1P11488 350 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ZFXP17010 805 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 TGM2P21980 687 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 MIPP30301 263 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 HOXA11P31270 313 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 PTPN9P43378 593 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 CPT1AP50416 773 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ADAM17P78536 824 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 IFI35P80217 286 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 OTUD4Q01804 1114 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 GPS1Q13098 491 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 NOMO1Q15155 1222 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ATP13A4Q4VNC1 1196 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 LACTB2Q53H82 288 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 DAB2IPQ5VWQ8 1189 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 OLFML2BQ68BL8 750 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 SCARA3Q6AZY7 606 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 LIMS2Q7Z4I7 341 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 CDR2LQ86X02 465 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 CRYBG2Q8N1P7 616 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ARFGAP1Q8N6T3 406 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 KCTD6Q8NC69 237 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 CCDC197Q8NCU1 140 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ACTL9Q8TC94 416 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 RSAD2Q8WXG1 361 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 PRCCQ92733 491 aaPredicted RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 GRAMD1AQ96CP6 724 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 RTP4Q96DX8 246 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 SEC16BQ96JE7 1060 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 CABS1Q96KC9 395 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 ZFRQ96KR1 1074 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 HSFY1Q96LI6 401 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 DDX23Q9BUQ8 820 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 SAMD15Q9P1V8 674 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 TSPAN16Q9UKR8 245 aa10.16□□□□□ -0.78
RTF1-206ENST00000560447 SMG5Q9UPR3 1016 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 GNEQ9Y223 722 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
RTF1-206ENST00000560447 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 PRPF4O43172 522 aaKnown RBP eCLIP10.15□□□□□ -0.78
RTF1-206ENST00000560447 NPTXRO95502 500 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 GSTA1P08263 222 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 SMIM10L2AP0DMW4 78 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 SMIM10L2BP0DMW5 78 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 CYP2C9P11712 490 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 TCF4P15884 667 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 PDGFRAP16234 1089 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 PECAM1P16284 738 aaPredicted RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 ATP2A2P16615 1042 aaKnown RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 IL1R2P27930 398 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 BCAT1P54687 386 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 SLC6A3Q01959 620 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 PLCB3Q01970 1234 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 TRIP13Q15645 432 aaPredicted RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 HIF1AQ16665 826 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 LONRF1Q17RB8 773 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 GOLGA7BQ2TAP0 167 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 KLHL38Q2WGJ6 581 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 SV2CQ496J9 727 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 GJC2Q5T442 439 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms