RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 CEP350Q5VT06 3117 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 NRXN3Q9Y4C0 1643 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 KIF1AQ12756 1690 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 ADGRL2O95490 1459 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 PXDNQ92626 1479 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 MYO1FO00160 1098 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 DNAJB5O75953 348 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 NTN1O95631 604 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 GCLCP48506 637 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 TOB1P50616 345 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 PCID2Q5JVF3 399 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 AWAT2Q6E213 333 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 WDR53Q7Z5U6 358 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 DTX2Q86UW9 622 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 TEKT5Q96M29 485 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 NELL2Q99435 816 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 TINAGL1Q9GZM7 467 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 PRSS22Q9GZN4 317 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 VPS16Q9H269 839 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 TUBA8Q9NY65 449 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 DLL3Q9NYJ7 618 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 COL14A1Q05707 1796 aaKnown RBP4.39□□□□□ -1.71
LRRC28-218ENST00000560236 MAP3K5Q99683 1374 aa4.39□□□□□ -1.71
LRRC28-218ENST00000560236 WDR90Q96KV7 1748 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 LRRC14BA6NHZ5 514 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 SLC16A3O15427 465 aaKnown RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 TLR5O60602 858 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 IL6RP08887 468 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 FTH1P19P0C7X4 201 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 MYBL2P10244 700 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 SFPQP23246 707 aaKnown RBP eCLIP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 ARHGAP25P42331 645 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 PLCD1P51178 756 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 POLGP54098 1239 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 FOXG1P55316 489 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 DSC2Q02487 901 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 TCF15Q12870 199 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 KIF22Q14807 665 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 GPR162Q16538 588 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 ABCB5Q2M3G0 1257 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 TREML2Q5T2D2 321 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 TMEM108Q6UXF1 575 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 ZNF517Q6ZMY9 492 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 CATSPERGQ6ZRH7 1159 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 MAVSQ7Z434 540 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 NECAB2Q7Z6G3 386 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 USP37Q86T82 979 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 CNGA4Q8IV77 575 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 GALNT16Q8N428 558 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 PNLDC1Q8NA58 520 aaKnown RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 WASF1Q92558 559 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 HMCESQ96FZ2 354 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-218ENST00000560236 SERPINB13Q9UIV8 391 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 ABCC5O15440 1437 aa4.38□□□□□ -1.71
LRRC28-218ENST00000560236 ONECUT2O95948 504 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 GNAI2P04899 355 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 ENGP17813 658 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 PRDX5P30044 214 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 LIPAP38571 399 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 NR4A2P43354 598 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 CLCN2P51788 898 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 CYP4F2P78329 520 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 HOXA4Q00056 320 aaPredicted RBP4.37□□□□□ -1.71
LRRC28-218ENST00000560236 PXDC1Q5TGL8 231 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 SYDE2Q5VT97 1194 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 ICE2Q659A1 982 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 SFRP4Q6FHJ7 346 aaPredicted RBP4.37□□□□□ -1.71
LRRC28-218ENST00000560236 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 CHSY1Q86X52 802 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 DDX42Q86XP3 938 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRRC28-218ENST00000560236 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 C3orf20Q8ND61 904 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
LRRC28-218ENST00000560236 C5orf34Q96MH7 638 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 ASB2Q96Q27 587 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 DUSP22Q9NRW4 184 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 SH2B3Q9UQQ2 575 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 POLHQ9Y253 713 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 PRKAB1Q9Y478 270 aa4.37□□□□□ -1.71
LRRC28-218ENST00000560236 CDC42BPGQ6DT37 1551 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 COL24A1Q17RW2 1714 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 RGPD8O14715 1765 aaPredicted RBP4.36□□□□□ -1.71
LRRC28-218ENST00000560236 CYP2D7A0A087X1C5 515 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 M0QYG6 137 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 ADAMTS3O15072 1205 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 ARIH2O95376 493 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 FXR1P51114 621 aaKnown RBP eCLIP4.36□□□□□ -1.71
LRRC28-218ENST00000560236 ADKP55263 362 aaKnown RBP4.36□□□□□ -1.71
LRRC28-218ENST00000560236 LAMB3Q13751 1172 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 RABEP1Q15276 862 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 CRELD2Q6UXH1 353 aaPredicted RBP4.36□□□□□ -1.71
LRRC28-218ENST00000560236 LRRC71Q8N4P6 559 aa4.36□□□□□ -1.71
LRRC28-218ENST00000560236 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.36□□□□□ -1.71
LRRC28-218ENST00000560236 CYP2W1Q8TAV3 490 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms