RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 SNX9Q9Y5X1 595 aa21.15■□□□□ 0.98
RABGGTA-214ENST00000560163 MYOFQ9NZM1 2061 aa21.15■□□□□ 0.98
RABGGTA-214ENST00000560163 TBCAO75347 108 aaKnown RBP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 APODP05090 189 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 CFIP05156 583 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 KRT18P05783 430 aaKnown RBP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 PLCG1P19174 1290 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 LMO2P25791 158 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 UBA7P41226 1012 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 GRIA2P42262 883 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 KCNA1Q09470 495 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 ZNF423Q2M1K9 1284 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 SOWAHCQ53LP3 525 aaPredicted RBP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 VSTM1Q6UX27 236 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 BRSK2Q8IWQ3 736 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 ADGRF2Q8IZF7 708 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 HDDC3Q8N4P3 179 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 CSGALNACT2Q8N6G5 542 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 CACTINQ8WUQ7 758 aaKnown RBP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 FAM213AQ9BRX8 229 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 ZDHHC4Q9NPG8 344 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 CRTAC1Q9NQ79 661 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 TRPM5Q9NZQ8 1165 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 BCCIPQ9P287 314 aaKnown RBP eCLIP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 MAGEC2Q9UBF1 373 aaPredicted RBP21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 ITGA11Q9UKX5 1188 aa21.14■□□□□ 0.97
RABGGTA-214ENST00000560163 MYO18AQ92614 2054 aaKnown RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 TCRBV21S2A2A0A5A6 115 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 SLC9A3R1O14745 358 aaPredicted RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 OPHN1O60890 802 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 RDXP35241 583 aaKnown RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 GFPT1Q06210 699 aaPredicted RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 C4orf50Q6ZRC1 276 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 DENND5BQ6ZUT9 1274 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 DPH6Q7L8W6 267 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 KBTBD7Q8WVZ9 684 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 HVCN1Q96D96 273 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 GTPBP2Q9BX10 602 aaKnown RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 ARHGEF4Q9NR80 690 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 DNAAF2Q9NVR5 837 aaKnown RBP21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 CPQQ9Y646 472 aa21.13■□□□□ 0.97
RABGGTA-214ENST00000560163 AP5Z1O43299 807 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 OAS1P00973 400 aaKnown RBP21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 BDNFP23560 247 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 PPP3CCP48454 512 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 ATXN3P54252 364 aaPredicted RBP21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 NOP14P78316 857 aaKnown RBP21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 RESTQ13127 1097 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 HNRNPDQ14103 355 aaKnown RBP21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 MINDY1Q8N5J2 469 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 OR2I1PQ8NGU4 316 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 LARP4BQ92615 738 aaKnown RBP21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 MYLPFQ96A32 169 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 HCN2Q9UL51 889 aa21.12■□□□□ 0.97
RABGGTA-214ENST00000560163 ARHGAP33O14559 1287 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 SCAMP3O14828 347 aaKnown RBP21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 GJB3O75712 270 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 GABRG2P18507 467 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 DDIT3P35638 169 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 GRIK1P39086 918 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 RBP5P82980 135 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 GRIN1Q05586 938 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 SCAPQ12770 1279 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 SFR1Q86XK3 245 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 PGBD3Q8N328 593 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 DEFB119Q8N690 84 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 KCNV2Q8TDN2 545 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 SAAL1Q96ER3 474 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 KIF2CQ99661 725 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 SYT15Q9BQS2 421 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 CDH9Q9ULB4 789 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 BPTFQ12830 3046 aa21.11■□□□□ 0.97
RABGGTA-214ENST00000560163 PLXNB3Q9ULL4 1909 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 ADH1CP00326 375 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 ADH5P11766 374 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 PSMC1P62191 440 aaKnown RBP21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 RPL6Q02878 288 aaKnown RBP21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 ZNF33AQ06730 810 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 C19orf48Q6RUI8 117 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 SLC36A4Q6YBV0 504 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 RABEPKQ7Z6M1 372 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 SLC41A1Q8IVJ1 513 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 ETFBKMTQ8IXQ9 262 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 CAMK1GQ96NX5 476 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 CD248Q9HCU0 757 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 SMPD4Q9NXE4 827 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 RBAKQ9NYW8 714 aaPredicted RBP21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 CFAP97Q9P2B7 532 aa21.1■□□□□ 0.97
RABGGTA-214ENST00000560163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 LDHAP00338 332 aaKnown RBP21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 KRT19P08727 400 aa21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 KDSRQ06136 332 aa21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 SLC14A1Q13336 389 aa21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 TRIP6Q15654 476 aaKnown RBP21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 LY6G5CQ5SRR4 150 aa21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 PDZD3Q86UT5 571 aa21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 KRI1Q8N9T8 703 aaKnown RBP21.09■□□□□ 0.97
RABGGTA-214ENST00000560163 ADAMTS14Q8WXS8 1223 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms