RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 PAQR9Q6ZVX9 377 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 TRAPPC11Q7Z392 1133 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 FILIP1Q7Z7B0 1213 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 IL17RCQ8NAC3 791 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 WBP2Q969T9 261 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
HERC1-204ENST00000559715 C8orf48Q96LL4 319 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 XYLT2Q9H1B5 865 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 DPEP3Q9H4B8 488 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
HERC1-204ENST00000559715 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 MYH10P35580 1976 aa11.84□□□□□ -0.51
HERC1-204ENST00000559715 SGK1O00141 431 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 SCAMP3O14828 347 aaKnown RBP11.83□□□□□ -0.52
HERC1-204ENST00000559715 TACC1O75410 805 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 RHOBTB1O94844 696 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 TMEM191BP0C7N4 346 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 PGFP49763 221 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 DGKEP52429 567 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 IRX4P78413 519 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
HERC1-204ENST00000559715 DHCR24Q15392 516 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 CNNM4Q6P4Q7 775 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 C4orf50Q6ZRC1 276 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 CCDC73Q6ZRK6 1079 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 WDR49Q8IV35 697 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 ACDQ96AP0 544 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 B3GNT5Q9BYG0 378 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 TRIM9Q9C026 710 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 TMEM74BQ9NUR3 256 aa11.83□□□□□ -0.52
HERC1-204ENST00000559715 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
HERC1-204ENST00000559715 FAM92AA1XBS5 289 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 TNFRSF10BO14763 440 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
HERC1-204ENST00000559715 GREM1O60565 184 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 NFATC1O95644 943 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 PROS1P07225 676 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 PTPN1P18031 435 aaKnown RBP11.82□□□□□ -0.52
HERC1-204ENST00000559715 GRIK1P39086 918 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 P2RY2P41231 377 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 STAT6P42226 847 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 NASPP49321 788 aaPredicted RBP11.82□□□□□ -0.52
HERC1-204ENST00000559715 SEC13P55735 322 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 MRPS21P82921 87 aaKnown RBP11.82□□□□□ -0.52
HERC1-204ENST00000559715 TAF10Q12962 218 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 MYO1EQ12965 1108 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 PSMD2Q13200 908 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 KCNB1Q14721 858 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ELF2Q15723 593 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ETFBKMTQ8IXQ9 262 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 PDILTQ8N807 584 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 FSIP1Q8NA03 581 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 TTC16Q8NEE8 873 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 TSTD1Q8NFU3 115 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 ZDHHC4Q9NPG8 344 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 TRPM5Q9NZQ8 1165 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 CPQQ9Y646 472 aa11.82□□□□□ -0.52
HERC1-204ENST00000559715 GCN1Q92616 2671 aaKnown RBP11.82□□□□□ -0.52
HERC1-204ENST00000559715 C1QTNF9BB2RNN3 333 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 CLDN5O00501 218 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 STAU1O95793 577 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 GNL1P36915 607 aaPredicted RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 PTGER3P43115 390 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 CYP27A1Q02318 531 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 CYP24A1Q07973 514 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 NR1H3Q13133 447 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 PSMD6Q15008 389 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 USP39Q53GS9 565 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 SNX30Q5VWJ9 437 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 PEAR1Q5VY43 1037 aaPredicted RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 TXNDC5Q8NBS9 432 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 SCFD1Q8WVM8 642 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 RLN3Q8WXF3 142 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms