RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PARM1Q6UWI2 310 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 ZNF606Q8WXB4 792 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 RSAD2Q8WXG1 361 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 KHSRPQ92945 711 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 PCMTD1Q96MG8 357 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 GCNAQ96QF7 691 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 RPP25Q9BUL9 199 aaKnown RBP21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 SLC46A2Q9BY10 475 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 UBXN6Q9BZV1 441 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 TASP1Q9H6P5 420 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 KCNK12Q9HB15 430 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 COMMD8Q9NX08 183 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 EHD2Q9NZN4 543 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 HESX1Q9UBX0 185 aa21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSPAN3-207ENST00000559494 RFX1P22670 979 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 HTR4Q13639 388 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 STILQ15468 1287 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 ARHGAP15Q53QZ3 475 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 FAM78AQ5JUQ0 283 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 TXNDC8Q6A555 127 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 PIGZQ86VD9 579 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 FGF14Q92915 247 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 ASB16Q96NS5 453 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 SLITRK6Q9H5Y7 841 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 PNPLA8Q9NP80 782 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 NLRC4Q9NPP4 1024 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 TRIOO75962 3097 aa21.43■■□□□ 1.02
TSPAN3-207ENST00000559494 MUC3AQ02505 3323 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 OBSL1O75147 1896 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 FAM92AA1XBS5 289 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 CFHP08603 1231 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 GNA15P30679 374 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 KIF11P52732 1056 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 BCAT1P54687 386 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 BST2Q10589 180 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 TANGO2Q6ICL3 276 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 GPIHBP1Q8IV16 184 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 MAB21L3Q8N8X9 362 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 RNF214Q8ND24 703 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 NEK11Q8NG66 645 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 ZSCAN18Q8TBC5 510 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 MRPS31Q92665 395 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 TRPM5Q9NZQ8 1165 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 IGSF9Q9P2J2 1179 aa21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 CHORDC1Q9UHD1 332 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-207ENST00000559494 ZNF840PA6NDX5 716 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 XPO1O14980 1071 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 THAP12O43422 761 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 FCARP24071 287 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 UBASH3AP57075 661 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 PTK2Q05397 1052 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 MON1AQ86VX9 555 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 SLC35F5Q8WV83 523 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 SMARCD2Q92925 531 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 FBXO32Q969P5 355 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 NXPE3Q969Y0 559 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 SLITRK1Q96PX8 696 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 PLA2G2FQ9BZM2 168 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 FBXO44Q9H4M3 255 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 MUTYHQ9UIF7 546 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 USP3Q9Y6I4 520 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 NUMBLQ9Y6R0 609 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 PATJQ8NI35 1801 aa21.41■■□□□ 1.02
TSPAN3-207ENST00000559494 F8VZ95 297 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 M0QYV0 167 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 GABBR2O75899 941 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 DDX6P26196 483 aaKnown RBP eCLIP21.4■■□□□ 1.022e-10■■□□□ 13.4
TSPAN3-207ENST00000559494 PPP3CCP48454 512 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 PGFP49763 221 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 JAM2P57087 298 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 SLC8A3P57103 927 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 RAB41Q5JT25 222 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 DENND1BQ6P3S1 775 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 MTSS1LQ765P7 747 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 SLC47A2Q86VL8 602 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 ARID3BQ8IVW6 561 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 SLC44A3Q8N4M1 653 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 SECISBP2LQ93073 1101 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 TRPV4Q9HBA0 871 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 GMIPQ9P107 970 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 SCML2Q9UQR0 700 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 DAAM1Q9Y4D1 1078 aa21.4■■□□□ 1.02
TSPAN3-207ENST00000559494 A0A1W2PQC6 194 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 C2orf78A6NCI8 922 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 SOBPA7XYQ1 873 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 TNFRSF10AO00220 468 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 MED7O43513 233 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 ZDHHC11BP0C7U3 371 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 SETSIPP0DME0 302 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 WEE1P30291 646 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 VIPR2P41587 438 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 GPD2P43304 727 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 PLA2G4AP47712 749 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 BPIFB4P59827 614 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 PMF1Q6P1K2 205 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 CMTM8Q8IZV2 173 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 OVCA2Q8WZ82 227 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 RSPRY1Q96DX4 576 aa21.39■■□□□ 1.01
TSPAN3-207ENST00000559494 SLC22A12Q96S37 553 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms