RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 BPIFA3Q9BQP9 254 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 GDAP2Q9NXN4 497 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 NEUROG3Q9Y4Z2 214 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 SNX9Q9Y5X1 595 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 IGF2RP11717 2491 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 OBSL1O75147 1896 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 H0Y626 953 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 K7EQS6 105 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 TRIM16O95361 564 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 APODP05090 189 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SPINK2P20155 84 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ACAT1P24752 427 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 COL9A2Q14055 689 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANO6Q4KMQ2 910 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 EOGTQ5NDL2 527 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 NUDT18Q6ZVK8 323 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SYT12Q8IV01 421 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ADGRF2Q8IZF7 708 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 HDDC3Q8N4P3 179 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 CCDC33Q8N5R6 958 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 DEFB124Q8NES8 71 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 MDGA1Q8NFP4 955 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SPATA17Q96L03 361 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ACCSQ96QU6 501 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 SLC22A12Q96S37 553 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 FIZ1Q96SL8 496 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 PNKPQ96T60 521 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 PCDHB13Q9Y5F0 798 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ABCA7Q8IZY2 2146 aa17.09■□□□□ 0.33
CDC42BPB-203ENST00000558867 ZZEF1O43149 2961 aa17.08■□□□□ 0.33
CDC42BPB-203ENST00000558867 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 TISP43B9A030 160 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 ZBTB24O43167 697 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 TMEM191BP0C7N4 346 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 BCKDHBP21953 392 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 HOXD12P35452 270 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 GRIK1P39086 918 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 TXLNAP40222 546 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 EIF2DP41214 584 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 E2F4Q16254 413 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 DENND5BQ6ZUT9 1274 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 RABEPKQ7Z6M1 372 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 BRSK2Q8IWQ3 736 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 CEP76Q8TAP6 659 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 ZCCHC14Q8WYQ9 949 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 CCDC39Q9UFE4 941 aa17.08■□□□□ 0.32
CDC42BPB-203ENST00000558867 LEFTY2O00292 366 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 TRIM66O15016 1216 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 ADH1CP00326 375 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 GAP43P17677 238 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 GARTP22102 1010 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 ADSSP30520 456 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 OPRD1P41143 372 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 P2RY2P41231 377 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 MAPK8P45983 427 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 ACAP1Q15027 740 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 LYSMD4Q5XG99 296 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 USP49Q70CQ1 688 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 TXNDC5Q8NBS9 432 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 OLIG1Q8TAK6 271 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 GATA6Q92908 595 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 NAT10Q9H0A0 1025 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
CDC42BPB-203ENST00000558867 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 GABRDO14764 452 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 AP5Z1O43299 807 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 KLF8O95600 359 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 ENGP17813 658 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms