RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 WDR44Q5JSH3 913 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 KRT39Q6A163 491 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 TRIM68Q6AZZ1 485 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 OSCP1Q8WVF1 389 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 OVCA2Q8WZ82 227 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 FAXDC2Q96IV6 333 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 TSG101Q99816 390 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 FAM126AQ9BYI3 521 aaPredicted RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 EBF3Q9H4W6 596 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 DMAP1Q9NPF5 467 aaPredicted RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 COMMD8Q9NX08 183 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 DMXL1Q9Y485 3027 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 ZNF292O60281 2723 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 SLC16A3O15427 465 aaKnown RBP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 AP1G2O75843 785 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 OLFM2O95897 454 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 ARSAP15289 507 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 CCR3P51677 355 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 SLC7A9P82251 487 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 AMPD2Q01433 879 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 LRRC63Q05C16 580 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 CCINQ13939 588 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 GAS6Q14393 721 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 PON2Q15165 354 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 SPEM1Q8N4L4 309 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 KIAA1958Q8N8K9 716 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 ZBTB44Q8NCP5 570 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 PDZD8Q8NEN9 1154 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 SH3RF2Q8TEC5 729 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 CSNK1G1Q9HCP0 422 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 ZSCAN32Q9NX65 697 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 DUS2Q9NX74 493 aaKnown RBP16.44■□□□□ 0.22
CSHL1-208ENST00000558609 PCDHGA2Q9Y5H1 932 aa16.44■□□□□ 0.22
CSHL1-208ENST00000558609 FAM92AA1XBS5 289 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 OAS1P00973 400 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 TDGF1P13385 188 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 CCDC130P13994 396 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 MXI1P50539 228 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 ZXDBP98169 803 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 ORC1Q13415 861 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 PPP2R5DQ14738 602 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 SNX30Q5VWJ9 437 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 TSSK4Q6SA08 328 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 FBXL13Q8NEE6 735 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 FBXO32Q969P5 355 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 CHFRQ96EP1 664 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 TWNKQ96RR1 684 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 HNRNPABQ99729 332 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 SMOQ99835 787 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 NT5C1AQ9BXI3 368 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 ECT2Q9H8V3 914 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 KRT82Q9NSB4 513 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 RBM12Q9NTZ6 932 aaKnown RBP16.43■□□□□ 0.22
CSHL1-208ENST00000558609 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
CSHL1-208ENST00000558609 MED19A0JLT2 244 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-208ENST00000558609 LEFTY2O00292 366 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 LILRB5O75023 590 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-208ENST00000558609 CILPO75339 1184 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 BEST1O76090 585 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 ABL1P00519 1130 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 PPP1R2P41236 205 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 CXCL12P48061 93 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 IFNAR2P48551 515 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 SLC5A3P53794 718 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-208ENST00000558609 STIM1Q13586 685 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 EML3Q32P44 896 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 TMEM196Q5HYL7 178 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 WHAMMQ8TF30 809 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 ATRIPQ8WXE1 791 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 ATP2A3Q93084 1043 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 RMDN1Q96DB5 314 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 DHTKD1Q96HY7 919 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-208ENST00000558609 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
CSHL1-208ENST00000558609 OTOGLQ3ZCN5 2332 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms