RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MOSPD3O75425 235 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 RTN3O95197 1032 aaPredicted RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 GYPCP04921 128 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 CEBPBP17676 345 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 SPECC1LQ69YQ0 1117 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 GAREM2Q75VX8 874 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 SHKBP1Q8TBC3 707 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 SLC20A1Q8WUM9 679 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 CPLX3Q8WVH0 158 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 TTLL2Q9BWV7 592 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 PHF7Q9BWX1 381 aaPredicted RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 EDEM3Q9BZQ6 932 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 ATXN3LQ9H3M9 355 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 MYO6Q9UM54 1294 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 PCDHGC3Q9UN70 934 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 A0A1W2PQJ5 194 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 ZNF197O14709 1029 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 TADA3O75528 432 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 FERP16591 822 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 KRT9P35527 623 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 PLA2G4AP47712 749 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 RGS7P49802 495 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 ZNF75DP51815 510 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 CYP4F8P98187 520 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 TEAD2Q15562 447 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 MEA1Q16626 185 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 TMEM150AQ86TG1 271 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 DDX1Q92499 740 aaKnown RBP18.41■□□□□ 0.54
TPM1-214ENST00000558544 IQCDQ96DY2 449 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 GCNAQ96QF7 691 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
TPM1-214ENST00000558544 NOCTQ9UK39 431 aaKnown RBP18.41■□□□□ 0.54
TPM1-214ENST00000558544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.41■□□□□ 0.541e-6■■■□□ 19.1
TPM1-214ENST00000558544 VCANP13611 3396 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 FGF19O95750 216 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 F11P03951 625 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 MMEP08473 750 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 YWHAQP27348 245 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 CDC25CP30307 473 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 CASP14P31944 242 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 GBP2P32456 591 aaPredicted RBP18.4■□□□□ 0.54
TPM1-214ENST00000558544 GPD2P43304 727 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 TAF10Q12962 218 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 ASIC2Q16515 512 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 E4F1Q66K89 784 aaPredicted RBP18.4■□□□□ 0.54
TPM1-214ENST00000558544 PMF1Q6P1K2 205 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 TMC6Q7Z403 805 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 NPAS3Q8IXF0 933 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 SLC35F5Q8WV83 523 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 FBXO32Q969P5 355 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 RPGRIP1Q96KN7 1286 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 MYADMQ96S97 322 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 UBXN6Q9BZV1 441 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 IL37Q9NZH6 218 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 CAPN11Q9UMQ6 739 aa18.4■□□□□ 0.54
TPM1-214ENST00000558544 C2CD4DB7Z1M9 353 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 PIK3R2O00459 728 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 BMP1P13497 986 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 TKTL1P51854 596 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 KIF11P52732 1056 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 ADIGQ0VDE8 80 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 TRIM14Q14142 442 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 RAB41Q5JT25 222 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 STXBP5Q5T5C0 1151 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 SFMBT2Q5VUG0 894 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 ZNF677Q86XU0 584 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
TPM1-214ENST00000558544 ZNF397Q8NF99 534 aaPredicted RBP18.39■□□□□ 0.53
TPM1-214ENST00000558544 FGF13Q92913 245 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 SLITRK1Q96PX8 696 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 FBXO44Q9H4M3 255 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 LRRC4Q9HBW1 653 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 COMMD8Q9NX08 183 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 CYTH4Q9UIA0 394 aa18.39■□□□□ 0.53
TPM1-214ENST00000558544 FAM170AA1A519 330 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 FAM92AA1XBS5 289 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 CCDC172P0C7W6 258 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 LCP1P13796 627 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 ZBED6P86452 979 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 CDR2Q01850 454 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 ARHGAP15Q53QZ3 475 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 POTEHQ6S545 545 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 OTOP3Q7RTS5 596 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 IRF2BP2Q7Z5L9 587 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 FMNL3Q8IVF7 1028 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 WDTC1Q8N5D0 677 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 TDRD5Q8NAT2 981 aaKnown RBP18.38■□□□□ 0.53
TPM1-214ENST00000558544 KCTD13Q8WZ19 329 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 MCRS1Q96EZ8 462 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 MRFAP1L1Q96HT8 127 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 SLITRK6Q9H5Y7 841 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 ST7Q9NRC1 585 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.38■□□□□ 0.53
TPM1-214ENST00000558544 GMIPQ9P107 970 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 CDH7Q9ULB5 785 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 LUC7L2Q9Y383 392 aaKnown RBP18.38■□□□□ 0.53
TPM1-214ENST00000558544 NR2E1Q9Y466 385 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 CEP83Q9Y592 693 aa18.38■□□□□ 0.53
TPM1-214ENST00000558544 USP17L7P0C7H9 530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms