RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SMOC2Q9H3U7 446 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 MYO16Q9Y6X6 1858 aa13.21□□□□□ -0.3
LRRC28-206ENST00000558471 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 TULP2O00295 520 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 TEX33O43247 280 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 FCARP24071 287 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 VIPR2P41587 438 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 PDE4CQ08493 712 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 TDGQ13569 410 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 PKDCCQ504Y2 493 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 LCLAT1Q6UWP7 414 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 PIGZQ86VD9 579 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 ARID3BQ8IVW6 561 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 SLITRK1Q96PX8 696 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 ERGIC2Q96RQ1 377 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 KXD1Q9BQD3 176 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 GANQ9H2C0 597 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 FAM207AQ9NSI2 230 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 TRPM5Q9NZQ8 1165 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRRC28-206ENST00000558471 SORCS3Q9UPU3 1222 aa13.2□□□□□ -0.3
LRRC28-206ENST00000558471 ZNF840PA6NDX5 716 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 SOBPA7XYQ1 873 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 EPHB6O15197 1021 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 CYP26A1O43174 497 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 DCXO43602 365 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ECI2O75521 394 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ABL1P00519 1130 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ALADP13716 330 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
LRRC28-206ENST00000558471 CLCN1P35523 988 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 PPP3CCP48454 512 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 KIF11P52732 1056 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 BCAT1P54687 386 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 SLC8A3P57103 927 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 TPM4P67936 248 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 STILQ15468 1287 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 FAM71AQ8IYT1 594 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 CMTM8Q8IZV2 173 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 FBXO32Q969P5 355 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-206ENST00000558471 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 CYP2S1Q96SQ9 504 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 SMG9Q9H0W8 520 aaKnown RBP13.19□□□□□ -0.3
LRRC28-206ENST00000558471 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 TRPV4Q9HBA0 871 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
LRRC28-206ENST00000558471 NCANO14594 1321 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 GOLGA6L19H0YKK7 550 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
LRRC28-206ENST00000558471 THAP12O43422 761 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
LRRC28-206ENST00000558471 SERPINC1P01008 464 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 CFHP08603 1231 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 ZDHHC11BP0C7U3 371 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 RFX1P22670 979 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 WEE1P30291 646 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 GNA15P30679 374 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 PGFP49763 221 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 POLR2FP61218 127 aaKnown RBP13.18□□□□□ -0.3
LRRC28-206ENST00000558471 ZXDAP98168 799 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
LRRC28-206ENST00000558471 NR1I3Q14994 352 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 SLC35F5Q8WV83 523 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 OVCA2Q8WZ82 227 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 EDAQ92838 391 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 SECISBP2LQ93073 1101 aaKnown RBP13.18□□□□□ -0.3
LRRC28-206ENST00000558471 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 NLRC4Q9NPP4 1024 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 GMIPQ9P107 970 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms