RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 CCDC149Q6ZUS6 474 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 PIGZQ86VD9 579 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 ERICH1Q86X53 443 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 STKLD1Q8NE28 680 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 SLC7A14Q8TBB6 771 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 SLC22A17Q8WUG5 538 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 PPP1R13BQ96KQ4 1090 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 C8orf48Q96LL4 319 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 NOX5Q96PH1 765 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 CPXM1Q96SM3 734 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 UBXN6Q9BZV1 441 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 SYNCQ9H7C4 482 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 MAN1C1Q9NR34 630 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 INSL5Q9Y5Q6 135 aa10.14□□□□□ -0.79
CUX1-216ENST00000558469 EIF3CLB5ME19 914 aaKnown RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 ZNF263O14978 683 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 C1RP00736 705 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 C8AP07357 584 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 ATF6P18850 670 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 TKTL1P51854 596 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 SNX16P57768 344 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 RBM10P98175 930 aaKnown RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 TWF1Q12792 350 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 HYAL1Q12794 435 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 IFRD2Q12894 506 aaPredicted RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 SPA17Q15506 151 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 C2CD6Q53TS8 623 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 PPM1LQ5SGD2 360 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 CYP4A22Q5TCH4 519 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 LIN9Q5TKA1 542 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 MMS22LQ6ZRQ5 1243 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 Q7L0L9 218 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 GPRIN1Q7Z2K8 1008 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 PHF13Q86YI8 300 aaPredicted RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 NUP93Q8N1F7 819 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 MSANTD4Q8NCY6 345 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 GIPC2Q8TF65 315 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 KCTD13Q8WZ19 329 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 SPATA17Q96L03 361 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 GAS2L1Q99501 681 aaPredicted RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 EIF3CQ99613 913 aaKnown RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 CDCA3Q99618 268 aaPredicted RBP10.13□□□□□ -0.79
CUX1-216ENST00000558469 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 ISCUQ9H1K1 167 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 PLEKHA4Q9H4M7 779 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 LRRC4Q9HBW1 653 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 ADAM22Q9P0K1 906 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 TJP2Q9UDY2 1190 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 DPP7Q9UHL4 492 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 NENFQ9UMX5 172 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 YIPF1Q9Y548 306 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 HCFC2Q9Y5Z7 792 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 MTCH2Q9Y6C9 303 aa10.13□□□□□ -0.79
CUX1-216ENST00000558469 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 SLC38A8A6NNN8 435 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 E5RJQ4 531 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 CCL16O15467 120 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
CUX1-216ENST00000558469 LCA5LO95447 670 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 LRG1P02750 347 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ERBB2P04626 1255 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 POU3F3P20264 500 aaPredicted RBP10.12□□□□□ -0.79
CUX1-216ENST00000558469 ABCB4P21439 1286 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 MMP8P22894 467 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ACADSBP45954 432 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 RPL34P49207 117 aaKnown RBP10.12□□□□□ -0.79
CUX1-216ENST00000558469 SLC5A3P53794 718 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 EPHB3P54753 998 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 GALCP54803 685 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ADIGQ0VDE8 80 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 PLD1Q13393 1074 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 MTMR3Q13615 1198 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ADGRE1Q14246 886 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 VEPH1Q14D04 833 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 TAF12Q16514 161 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 PTPN20Q4JDL3 420 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 RAB41Q5JT25 222 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 C10orf76Q5T2E6 689 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 PPP1R2P3Q6NXS1 205 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ELMSAN1Q6PJG2 1045 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 DENND5BQ6ZUT9 1274 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 TOGARAM2Q6ZUX3 1019 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 MON1BQ7L1V2 547 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 TMEM110Q86TL2 294 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 MCOLN2Q8IZK6 566 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 VN1R2Q8NFZ6 395 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 SCAMP5Q8TAC9 235 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 IPO4Q8TEX9 1081 aaKnown RBP10.12□□□□□ -0.79
CUX1-216ENST00000558469 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 C18orf8Q96DM3 657 aa10.12□□□□□ -0.79
CUX1-216ENST00000558469 HSFY1Q96LI6 401 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms