RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TMEM30AQ9NV96 361 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 CFAP97Q9P2B7 532 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 INVSQ9Y283 1065 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 DCHS1Q96JQ0 3298 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 DMXL1Q9Y485 3027 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 SDK1Q7Z5N4 2213 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 KLRC4O43908 158 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 GDF9O60383 454 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 YWHAQP27348 245 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 DLG4P78352 724 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 ZXDBP98169 803 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 DMC1Q14565 340 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 FBXO43Q4G163 708 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 CACNA2D4Q7Z3S7 1137 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 ACOT1Q86TX2 421 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
TPM1-211ENST00000558314 KIAA0895Q8NCT3 520 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 GAB3Q8WWW8 586 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 KCNK16Q96T55 309 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 NACA2Q9H009 215 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 XYLT2Q9H1B5 865 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
TPM1-211ENST00000558314 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.24
TPM1-211ENST00000558314 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
TPM1-211ENST00000558314 NR3C1P04150 777 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 DGKEP52429 567 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 NOP14P78316 857 aaKnown RBP16.51■□□□□ 0.23
TPM1-211ENST00000558314 SF3A2Q15428 464 aaKnown RBP16.51■□□□□ 0.23
TPM1-211ENST00000558314 CSRP2Q16527 193 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 NUP93Q8N1F7 819 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 CCDC33Q8N5R6 958 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 SCAMP5Q8TAC9 235 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 NETO1Q8TDF5 533 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 PARD3BQ8TEW8 1205 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 EZH1Q92800 747 aaPredicted RBP16.51■□□□□ 0.23
TPM1-211ENST00000558314 JAKMIP2Q96AA8 810 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 ACDQ96AP0 544 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 RTKNQ9BST9 563 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 TTLL2Q9BWV7 592 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
TPM1-211ENST00000558314 ANTXRLA6NF34 631 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 DCLK1O15075 740 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 LRP3O75074 770 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 AP1G2O75843 785 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
TPM1-211ENST00000558314 VNN1O95497 513 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
TPM1-211ENST00000558314 CYP17A1P05093 508 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 IRF1P10914 325 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 P4HA1P13674 534 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 CCDC130P13994 396 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 HOXA6P31267 233 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 GBP1P32455 592 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 SLC6A11P48066 632 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 PPP3CCP48454 512 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 AP3M2P53677 418 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 KRT85P78386 507 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 KDSRQ06136 332 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 SPOPLQ6IQ16 392 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 TSTD1Q8NFU3 115 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
TPM1-211ENST00000558314 CEP295NLQ96MC4 621 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 KRT82Q9NSB4 513 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
TPM1-211ENST00000558314 ANAPC1Q9H1A4 1944 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 CACNA1AO00555 2505 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 CALUO43852 315 aaPredicted RBP16.49■□□□□ 0.23
TPM1-211ENST00000558314 APBB3O95704 486 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 STAU1O95793 577 aaKnown RBP16.49■□□□□ 0.23
TPM1-211ENST00000558314 C4BPAP04003 597 aaKnown RBP16.49■□□□□ 0.23
TPM1-211ENST00000558314 FAM163BP0C2L3 166 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 CMA1P23946 247 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 ADORA2BP29275 332 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 SYKP43405 635 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 NDST1P52848 882 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 SLC5A3P53794 718 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 SLC7A9P82251 487 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 DHCR24Q15392 516 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 DMAP1Q9NPF5 467 aaPredicted RBP16.49■□□□□ 0.23
TPM1-211ENST00000558314 ZDHHC4Q9NPG8 344 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 GMIPQ9P107 970 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 SH3BP1Q9Y3L3 701 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 SPTBN2O15020 2390 aa16.49■□□□□ 0.23
TPM1-211ENST00000558314 PDXKO00764 312 aa16.48■□□□□ 0.23
TPM1-211ENST00000558314 SLC9A3R1O14745 358 aaPredicted RBP16.48■□□□□ 0.23
TPM1-211ENST00000558314 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
TPM1-211ENST00000558314 TCF3P15923 654 aa16.48■□□□□ 0.23
TPM1-211ENST00000558314 PFKLP17858 780 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms