RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 LRRC4CQ9HCJ2 640 aa10.4□□□□□ -0.74
IGKV2D-28-202ENST00000558026 TNFSF13BQ9Y275 285 aa10.4□□□□□ -0.74
IGKV2D-28-202ENST00000558026 ANKRD6Q9Y2G4 727 aa10.4□□□□□ -0.74
IGKV2D-28-202ENST00000558026 BSNQ9UPA5 3926 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 METTL12A8MUP2 240 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LEFTY2O00292 366 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SLC27A2O14975 620 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PRPF3O43395 683 aaKnown RBP10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 C1SP09871 688 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ADH5P11766 374 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TYMPP19971 482 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CHMLP26374 656 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NLRP5P59047 1200 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SLC10A6Q3KNW5 377 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PRAMEF14Q5SWL7 426 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TRMT11Q7Z4G4 463 aaKnown RBP10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SNX19Q92543 992 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 IGSF8Q969P0 613 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ZNF578Q96N58 590 aaPredicted RBP10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NACC1Q96RE7 527 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ARHGAP26Q9UNA1 814 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CLCA2Q9UQC9 943 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CENPEQ02224 2701 aa10.39□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SETD2Q9BYW2 2564 aaPredicted RBP10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SGSM2O43147 1006 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LYPLA2O95372 231 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CSH1P0DML2 217 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CSH2P0DML3 217 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CDK4P11802 303 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TCF3P15923 654 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 HDCP19113 662 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NAMPTP43490 491 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 AFF3P51826 1226 aaKnown RBP10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 INSM1Q01101 510 aaPredicted RBP10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 KCNB1Q14721 858 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DDR2Q16832 855 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 INAVAQ3KP66 663 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 APBB1IPQ7Z5R6 666 aaPredicted RBP10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CHPFQ8IZ52 775 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DCBLD1Q8N8Z6 715 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CADM4Q8NFZ8 388 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 RUFY2Q8WXA3 655 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 VCPIP1Q96JH7 1222 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PHF12Q96QT6 1004 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 HSD17B14Q9BPX1 270 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DPH1Q9BZG8 443 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PTPRHQ9HD43 1115 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TMLHEQ9NVH6 421 aa10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PLEKHB1Q9UF11 243 aaPredicted RBP10.38□□□□□ -0.75
IGKV2D-28-202ENST00000558026 WASH3PC4AMC7 463 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 M0R2N6 131 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TRAK2O60296 914 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 FAM87AP0C7U9 286 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LRPAP1P30533 357 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 GABREP78334 506 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SAFBQ15424 915 aaKnown RBP eCLIP10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LY6G5CQ5SRR4 150 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ETFBKMTQ8IXQ9 262 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 FAM26EQ8N5C1 309 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EID2Q8N6I1 236 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MCPH1Q8NEM0 835 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SPPL2BQ8TCT7 592 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EXTL1Q92935 676 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SENP8Q96LD8 212 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MTMR9Q96QG7 549 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ACO2Q99798 780 aaKnown RBP10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TARS2Q9BW92 718 aaKnown RBP10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 C22orf23Q9BZE7 217 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TM9SF3Q9HD45 589 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SMPD4Q9NXE4 827 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 USP36Q9P275 1121 aaKnown RBP10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PCDHA4Q9UN74 947 aa10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ARID1BQ8NFD5 2236 aaPredicted RBP10.37□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ABLIM1O14639 778 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TULP3O75386 442 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PRPF40AO75400 957 aaKnown RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ADH1CP00326 375 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NFICP08651 508 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ODC1P11926 461 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 GSPT1P15170 499 aaKnown RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 GRIK1P39086 918 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 HDAC1Q13547 482 aaPredicted RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NPY5RQ15761 445 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CCDC81Q6ZN84 652 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CACUL1Q86Y37 369 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TERB1Q8NA31 727 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 KCNV2Q8TDN2 545 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ZBTB45Q96K62 511 aaPredicted RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 GABRG3Q99928 467 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MKRN2Q9H000 416 aaKnown RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ZNF768Q9H5H4 540 aaKnown RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TTC12Q9H892 705 aaPredicted RBP10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ASCL3Q9NQ33 180 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SCN1AP35498 2009 aa10.36□□□□□ -0.75
IGKV2D-28-202ENST00000558026 A0A1B0GTQ1 180 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms