RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SLC6A11P48066 632 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 ATXN3P54252 364 aaPredicted RBP19.61■□□□□ 0.73
ABCD4-228ENST00000557588 USP46P62068 366 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 DUOXA1Q1HG43 343 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 ZNF423Q2M1K9 1284 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 SOWAHAQ2M3V2 549 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 SCARA3Q6AZY7 606 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 DENND5BQ6ZUT9 1274 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 LIMS2Q7Z4I7 341 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 RABEPKQ7Z6M1 372 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 CACTINQ8WUQ7 758 aaKnown RBP19.61■□□□□ 0.73
ABCD4-228ENST00000557588 ARHGEF4Q9NR80 690 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 RBAKQ9NYW8 714 aaPredicted RBP19.61■□□□□ 0.73
ABCD4-228ENST00000557588 SIX4Q9UIU6 781 aa19.61■□□□□ 0.73
ABCD4-228ENST00000557588 IGSF10Q6WRI0 2623 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 ZNF840PA6NDX5 716 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 AP5Z1O43299 807 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 OAS1P00973 400 aaKnown RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 GRIA2P42262 883 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 TNFRSF4P43489 277 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 PPP3CCP48454 512 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 FAM193AP78312 1265 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 GFPT1Q06210 699 aaPredicted RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 HNRNPDQ14103 355 aaKnown RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 SFR1Q86XK3 245 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 PHTF2Q8N3S3 785 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 CSGALNACT2Q8N6G5 542 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 ZSWIM2Q8NEG5 633 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 FAM84AQ96KN4 292 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 SYT15Q9BQS2 421 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 GTPBP2Q9BX10 602 aaKnown RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 FSCN3Q9NQT6 498 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 EHD2Q9NZN4 543 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
ABCD4-228ENST00000557588 CDH9Q9ULB4 789 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 GPSM3Q9Y4H4 160 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 CPQQ9Y646 472 aa19.6■□□□□ 0.73
ABCD4-228ENST00000557588 OPHN1O60890 802 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 ATP2C2O75185 946 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 ADH5P11766 374 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 PSMC1P62191 440 aaKnown RBP19.59■□□□□ 0.73
ABCD4-228ENST00000557588 NOP14P78316 857 aaKnown RBP19.59■□□□□ 0.73
ABCD4-228ENST00000557588 RBP5P82980 135 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 KDSRQ06136 332 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 MAPRE1Q15691 268 aaKnown RBP19.59■□□□□ 0.73
ABCD4-228ENST00000557588 EMC10Q5UCC4 262 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 RHBDF2Q6PJF5 856 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 DPH6Q7L8W6 267 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 CHCHD4Q8N4Q1 142 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 KRI1Q8N9T8 703 aaKnown RBP19.59■□□□□ 0.73
ABCD4-228ENST00000557588 RASSF8Q8NHQ8 419 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 SAAL1Q96ER3 474 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 MTMR12Q9C0I1 747 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 RNF38Q9H0F5 515 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 ZDHHC4Q9NPG8 344 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 CRTAC1Q9NQ79 661 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 EXOC7Q9UPT5 735 aa19.59■□□□□ 0.73
ABCD4-228ENST00000557588 GCN1Q92616 2671 aaKnown RBP19.59■□□□□ 0.73
ABCD4-228ENST00000557588 SEC24BO95487 1268 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 LDHAP00338 332 aaKnown RBP19.58■□□□□ 0.72
ABCD4-228ENST00000557588 KRT19P08727 400 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 CD59P13987 128 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 BDNFP23560 247 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 ANXA13P27216 316 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 LONP1P36776 959 aaKnown RBP19.58■□□□□ 0.72
ABCD4-228ENST00000557588 GRIK1P39086 918 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 RPL6Q02878 288 aaKnown RBP19.58■□□□□ 0.72
ABCD4-228ENST00000557588 KCNA1Q09470 495 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 SLC36A4Q6YBV0 504 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 DDX42Q86XP3 938 aaKnown RBP eCLIP19.58■□□□□ 0.72
ABCD4-228ENST00000557588 MINDY1Q8N5J2 469 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 KCNV2Q8TDN2 545 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 DNAAF2Q9NVR5 837 aaKnown RBP19.58■□□□□ 0.72
ABCD4-228ENST00000557588 SMPD4Q9NXE4 827 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 CFAP97Q9P2B7 532 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 SEL1LQ9UBV2 794 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 MYOFQ9NZM1 2061 aa19.58■□□□□ 0.72
ABCD4-228ENST00000557588 SCAMP3O14828 347 aaKnown RBP19.57■□□□□ 0.72
ABCD4-228ENST00000557588 TRIM66O15016 1216 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 GARTP22102 1010 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 LMO2P25791 158 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 GRIN1Q05586 938 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
ABCD4-228ENST00000557588 TRMT11Q7Z4G4 463 aaKnown RBP19.57■□□□□ 0.72
ABCD4-228ENST00000557588 ETFBKMTQ8IXQ9 262 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 PGBD3Q8N328 593 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 PCED1BQ96HM7 432 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 CALCOCO1Q9P1Z2 691 aa19.57■□□□□ 0.72
ABCD4-228ENST00000557588 MYO18AQ92614 2054 aaKnown RBP19.56■□□□□ 0.72
ABCD4-228ENST00000557588 ARHGAP33O14559 1287 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 TMEM191BP0C7N4 346 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 GABRG2P18507 467 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 WARSP23381 471 aaKnown RBP19.56■□□□□ 0.72
ABCD4-228ENST00000557588 DDIT3P35638 169 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 CYP27A1Q02318 531 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 ZNF33AQ06730 810 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 MYO1EQ12965 1108 aa19.56■□□□□ 0.72
ABCD4-228ENST00000557588 C8orf48Q96LL4 319 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms