RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 UXTQ9UBK9 157 aaPredicted RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 AGO2Q9UKV8 859 aaKnown RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 PCDHB5Q9Y5E4 795 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 CFAP47Q6ZTR5 3102 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SCN1AP35498 2009 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 KPNA7A9QM74 516 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TM4SF5O14894 197 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 RPP40O75818 363 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 SOAT2O75908 522 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 KRT18P05783 430 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 HMGA1P17096 107 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 TXLNAP40222 546 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 ACOT2P49753 483 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 NLRP12P59046 1061 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 RPL10AP62906 217 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 CYP4F8P98187 520 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TSPY1Q01534 308 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TNK2Q07912 1038 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 BFSP1Q12934 665 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TEAD4Q15561 434 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TBCELQ5QJ74 424 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 HEATR6Q6AI08 1181 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 IL31Q6EBC2 164 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 ZNF720Q7Z2F6 126 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TMEM150AQ86TG1 271 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TMEM86AQ8N2M4 240 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TMEM130Q8N3G9 435 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 TMEM151AQ8N4L1 468 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 KIAA1958Q8N8K9 716 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 LARP4BQ92615 738 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 MRPS31Q92665 395 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 MYRFLQ96LU7 910 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 CEP295NLQ96MC4 621 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 ZNF560Q96MR9 790 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 PYM1Q9BRP8 204 aaKnown RBP9.32□□□□□ -0.92
VRK1-206ENST00000557222 TMEM206Q9H813 350 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 HPS4Q9NQG7 708 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 SEL1LQ9UBV2 794 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 GREB1Q4ZG55 1949 aa9.32□□□□□ -0.92
VRK1-206ENST00000557222 ANKRD63C9JTQ0 380 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 EXTL3O43909 919 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 LDHAP00338 332 aaKnown RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 BMP4P12644 408 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 TCF3P15923 654 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 PFKLP17858 780 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 PLCG1P19174 1290 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 GJB2P29033 226 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 NMT1P30419 496 aaKnown RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 NOS2P35228 1153 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 SHC2P98077 582 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 SRSF5Q13243 272 aaKnown RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 AASDHQ4L235 1098 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 FSTL4Q6MZW2 842 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 CC2D1AQ6P1N0 951 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 C11orf74Q86VG3 221 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 LRRC52Q8N7C0 313 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 C12orf50Q8NA57 414 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 LRRC15Q8TF66 581 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 CACTINQ8WUQ7 758 aaKnown RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 USP13Q92995 863 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 STRA6Q9BX79 667 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 C2orf42Q9NWW7 574 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 EBF1Q9UH73 591 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 EXOC7Q9UPT5 735 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 KIF26AQ9ULI4 1882 aaPredicted RBP9.31□□□□□ -0.92
VRK1-206ENST00000557222 FAM208BQ5VWN6 2430 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 DENND4CQ5VZ89 1909 aa9.31□□□□□ -0.92
VRK1-206ENST00000557222 HUS1O60921 280 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 NOL4O94818 638 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 RHOBTB1O94844 696 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 GAP43P17677 238 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 GARTP22102 1010 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ADSSP30520 456 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 LHX1P48742 406 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 PDE6CP51160 858 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 GALK1P51570 392 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 MYL7Q01449 175 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 FAM160A1Q05DH4 1040 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ALCAMQ13740 583 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 KARSQ15046 597 aaKnown RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 ST3GAL2Q16842 350 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 CFAP221Q4G0U5 840 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 C1orf229Q6ZS94 237 aaPredicted RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 SYT13Q7L8C5 426 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 DPH6Q7L8W6 267 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 BRSK2Q8IWQ3 736 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 CPA6Q8N4T0 437 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms