RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 NXF3Q9H4D5 531 aaKnown RBP16.02■□□□□ 0.15
TMEM55B-207ENST00000557041 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.15
TMEM55B-207ENST00000557041 IGF2BP3O00425 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 LPXNO60711 386 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 TMEM237Q96Q45 408 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 TRIM56Q9BRZ2 755 aaKnown RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 PSMC3IPQ9P2W1 217 aaPredicted RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 BARX2Q9UMQ3 279 aaPredicted RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 TNFSF13BQ9Y275 285 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 TROVE2P10155 538 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 VDRP11473 427 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ADRA1DP25100 572 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 GHRHRQ02643 423 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 FNBP1LQ5T0N5 605 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 TSHZ1Q6ZSZ6 1077 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ATXN2LQ8WWM7 1075 aaKnown RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 LRRC37BQ96QE4 947 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF518BQ9C0D4 1074 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ZC3H7BQ9UGR2 993 aaKnown RBP16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 ARL2BPQ9Y2Y0 163 aa16.01■□□□□ 0.15
TMEM55B-207ENST00000557041 APOL1O14791 398 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 GAS2O43903 313 aaKnown RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 SNX3O60493 162 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 HUS1O60921 280 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 IVDP26440 423 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 ARL4AP40617 200 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PTK7Q13308 1070 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 KDELC2Q7Z4H8 507 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 XYLT1Q86Y38 959 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 CLEC4CQ8WTT0 213 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 XYLT2Q9H1B5 865 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 WDR35Q9P2L0 1181 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PHTF1Q9UMS5 762 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 L3MBTL1Q9Y468 752 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 STYXL1Q9Y6J8 313 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 CFAP69A5D8W1 941 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 KBTBD13C9JR72 458 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 FAM155BO75949 473 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 MYCP01106 439 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 KCNJ2P63252 427 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 MORF4L2Q15014 288 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 CCDC6Q16204 474 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PMF1Q6P1K2 205 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 VSTM1Q6UX27 236 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PLPPR4Q7Z2D5 763 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 C12orf50Q8NA57 414 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 HASPINQ8TF76 798 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 ADAM7Q9H2U9 754 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PDZD7Q9H5P4 517 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 RSAD1Q9HA92 442 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PCDH9Q9HC56 1237 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 RECQL4O94761 1208 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 GNL1P36915 607 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 CCDC142Q17RM4 750 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
TMEM55B-207ENST00000557041 KIRREL3Q8IZU9 778 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 DNAAF3Q8N9W5 541 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 CNPY3Q9BT09 278 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 TXLNGYQ9BZA5 131 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 KLC2Q9H0B6 622 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 CXCL16Q9H2A7 254 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 DPEP3Q9H4B8 488 aa16■□□□□ 0.15
TMEM55B-207ENST00000557041 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 GEMIN4P57678 1058 aaKnown RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 PDE1BQ01064 536 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 RNASELQ05823 741 aaKnown RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 DGKDQ16760 1214 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 FZD8Q9H461 694 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 HAO1Q9UJM8 370 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 MYO18AQ92614 2054 aaKnown RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 ADGRA2Q96PE1 1338 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 CLDN5O00501 218 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 B4GALT4O60513 344 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 KLF1Q13351 362 aaPredicted RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 KBTBD12Q3ZCT8 623 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 MSS51Q4VC12 460 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF484Q5JVG2 852 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 HEATR6Q6AI08 1181 aaKnown RBP15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 TRIM68Q6AZZ1 485 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 CES3Q6UWW8 571 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 ILDR2Q71H61 639 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 AGR3Q8TD06 166 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 SIK2Q9H0K1 926 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 COPEO14579 308 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 C22orf31O95567 290 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 PIGRP01833 764 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 PTP4A2Q12974 167 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 NAA25Q14CX7 972 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 SLC2A14Q8TDB8 520 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 TCP10LQ8TDR4 215 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 CDHR5Q9HBB8 845 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms