RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 NTPCRQ9BSD7 190 aaKnown RBP10□□□□□ -0.81
SYNE2-224ENST00000557024 FOXP1Q9H334 677 aaPredicted RBP10□□□□□ -0.81
SYNE2-224ENST00000557024 UXTQ9UBK9 157 aaPredicted RBP10□□□□□ -0.81
SYNE2-224ENST00000557024 NOL7Q9UMY1 257 aaKnown RBP10□□□□□ -0.81
SYNE2-224ENST00000557024 MTMR6Q9Y217 621 aa10□□□□□ -0.81
SYNE2-224ENST00000557024 NUP205Q92621 2012 aa10□□□□□ -0.81
SYNE2-224ENST00000557024 MYMKA6NI61 221 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 PP2D1A8MPX8 630 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 SCAMP3O14828 347 aaKnown RBP9.99□□□□□ -0.81
SYNE2-224ENST00000557024 OGTO15294 1046 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 ADAM23O75077 832 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 NOL4O94818 638 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 CYP17A1P05093 508 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 ADRB2P07550 413 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 HDCP19113 662 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 GUCY2CP25092 1073 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 SLC6A11P48066 632 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 LIG4P49917 911 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 TSPY1Q01534 308 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 ZNF33AQ06730 810 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 C19orf57Q0VDD7 668 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 KYAT1Q16773 422 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 TUSC1Q2TAM9 212 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 EOGTQ5NDL2 527 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 BRAPQ7Z569 592 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 RABEPKQ7Z6M1 372 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 SLCO6A1Q86UG4 719 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 TRMT2BQ96GJ1 504 aaKnown RBP9.99□□□□□ -0.81
SYNE2-224ENST00000557024 MYRFLQ96LU7 910 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 GCNT4Q9P109 453 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 ARHGAP26Q9UNA1 814 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 APOBEC2Q9Y235 224 aaKnown RBP9.99□□□□□ -0.81
SYNE2-224ENST00000557024 THADAQ6YHU6 1953 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 APC2O95996 2303 aa9.99□□□□□ -0.81
SYNE2-224ENST00000557024 HNRNPDLO14979 420 aaKnown RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 GJB3O75712 270 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 AP1G2O75843 785 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 KAT7O95251 611 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 APODP05090 189 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 SYPP08247 313 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 CYP2F1P24903 491 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 CDC25AP30304 524 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 KIR2DL1P43626 348 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 TAF6P49848 677 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 USP46P62068 366 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 RPL10AP62906 217 aaKnown RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 ZXDBP98169 803 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 KDSRQ06136 332 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 SLC14A1Q13336 389 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 ORC2Q13416 577 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PKP1Q13835 747 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PLEKHG6Q3KR16 790 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 HSF5Q4G112 596 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 TTC38Q5R3I4 469 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 TOGARAM2Q6ZUX3 1019 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 C12orf40Q86WS4 652 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 MARCH9Q86YJ5 346 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 C4orf32Q8N8J7 132 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 SPATA18Q8TC71 538 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 HSPA12BQ96MM6 686 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 ZNF396Q96N95 335 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PNMA5Q96PV4 448 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PNKPQ96T60 521 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 MSTO1Q9BUK6 570 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 TIPINQ9BVW5 301 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
SYNE2-224ENST00000557024 PCNX2A6NKB5 2137 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 CYSRT1A8MQ03 144 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 LEFTY2O00292 366 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 TRAK2O60296 914 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 C1QL1O75973 258 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 TCF3P15923 654 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 GABRG2P18507 467 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
SYNE2-224ENST00000557024 DDIT3P35638 169 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ATP2C1P98194 919 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-224ENST00000557024 CYP4F3Q08477 520 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 RESTQ13127 1097 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 DHCR24Q15392 516 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
SYNE2-224ENST00000557024 NFE2Q16621 373 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-224ENST00000557024 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 SLC36A4Q6YBV0 504 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 SLC41A1Q8IVJ1 513 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 SCN4BQ8IWT1 228 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 CD302Q8IX05 232 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 IGSF22Q8N9C0 903 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 TRIML1Q8N9V2 468 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 FSIP1Q8NA03 581 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ERLEC1Q96DZ1 483 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ABCB6Q9NP58 842 aa9.97□□□□□ -0.81
SYNE2-224ENST00000557024 ARHGEF4Q9NR80 690 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms