RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 PDE1AP54750 535 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 EIF5P55010 431 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CTXN1P60606 82 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 NOMO3P69849 1222 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CXADRP78310 365 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CCZ1BP86790 482 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CCZ1P86791 482 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CDC42EP1Q00587 391 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ZNF267Q14586 743 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ZNF169Q14929 603 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 BRD3Q15059 726 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 KHDC1Q4VXA5 237 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 NOMO2Q5JPE7 1267 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TMEM240Q5SV17 173 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 PAPD7Q5XG87 772 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 NOL8Q76FK4 1167 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ARHGEF25Q86VW2 580 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TPH2Q8IWU9 490 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CNPY4Q8N129 248 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 PRR18Q8N4B5 295 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ACTRT2Q8TDY3 377 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 NSUN6Q8TEA1 469 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 DNAAF4Q8WXU2 420 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CYFIP2Q96F07 1278 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 EIF3CQ99613 913 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 OSBPL5Q9H0X9 879 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ZSCAN16Q9H4T2 348 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 CASS4Q9NQ75 786 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TYW1Q9NV66 732 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TBCCD1Q9NVR7 557 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TRMT1Q9NXH9 659 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 SUFUQ9UMX1 484 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 SLC45A2Q9UMX9 530 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 MYO5BQ9ULV0 1848 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 NRXN1Q9ULB1 1477 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 ADGRB1O14514 1584 aa4.22□□□□□ -1.73
FOXN3-213ENST00000556916 FAM208AQ9UK61 1670 aaKnown RBP4.22□□□□□ -1.73
FOXN3-213ENST00000556916 TTC21AQ8NDW8 1320 aa4.21□□□□□ -1.73
FOXN3-213ENST00000556916 ZFYVE9O95405 1425 aa4.21□□□□□ -1.73
FOXN3-213ENST00000556916 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.73
FOXN3-213ENST00000556916 ATP10DQ9P241 1426 aa4.21□□□□□ -1.73
FOXN3-213ENST00000556916 COL11A2P13942 1736 aaPredicted RBP4.21□□□□□ -1.73
FOXN3-213ENST00000556916 MYH7P12883 1935 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 CDHR4A6H8M9 788 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 MYADML2A6NDP7 307 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 BECN2A8MW95 431 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 GRM6O15303 877 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 ZSCAN12O43309 604 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 ERLIN1O75477 346 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 POU2F2P09086 479 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 ZNF853P0CG23 659 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 GJB2P29033 226 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 AK2P54819 239 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 EVCP57679 992 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 HSD11B2P80365 405 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 MRPS35P82673 323 aaKnown RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 TLE1Q04724 770 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 SNAPC2Q13487 334 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 PIN1Q13526 163 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 IQCB1Q15051 598 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 CAMK4Q16566 473 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 STX1AQ16623 288 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 TWISTNBQ3B726 338 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 ODR4Q5SWX8 454 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 EGFL6Q8IUX8 553 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 JPH3Q8WXH2 748 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 FUBP1Q96AE4 644 aaKnown RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 TTC14Q96N46 770 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 MPHOSPH8Q99549 860 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 NAT10Q9H0A0 1025 aaKnown RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 C11orf54Q9H0W9 315 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 VSX1Q9NZR4 365 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 LRIT1Q9P2V4 623 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-213ENST00000556916 KCNE5Q9UJ90 142 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 MTMR6Q9Y217 621 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 EXOC6BQ9Y2D4 811 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 PCDHA3Q9Y5H8 950 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 TSPOAP1O95153 1857 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 PLCH2O75038 1416 aa4.21□□□□□ -1.74
FOXN3-213ENST00000556916 CDK12Q9NYV4 1490 aaPredicted RBP4.2□□□□□ -1.74
FOXN3-213ENST00000556916 KIAA0232Q92628 1395 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 CCDC151A5D8V7 595 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 GOLGA6L9A6NEM1 432 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 TMCO5BA8MYB1 307 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 MAP2K7O14733 419 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 SGTAO43765 313 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 RBMXL2O75526 392 aaKnown RBP4.2□□□□□ -1.74
FOXN3-213ENST00000556916 C1QL1O75973 258 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 URI1O94763 535 aaPredicted RBP4.2□□□□□ -1.74
FOXN3-213ENST00000556916 SEC31AO94979 1220 aaKnown RBP4.2□□□□□ -1.74
FOXN3-213ENST00000556916 ZFPL1O95159 310 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 GPANK1O95872 356 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 TUBBP07437 444 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 MYBP10242 640 aa4.2□□□□□ -1.74
FOXN3-213ENST00000556916 SFPQP23246 707 aaKnown RBP eCLIP4.2□□□□□ -1.742e-6■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms