RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, human

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FCF1-208	ENST00000556814	CAGE1	Q8TC20	777 aa		4.99	□□□□□ -1.61
FCF1-208	ENST00000556814	MAGEB5	Q9BZ81	275 aa		4.99	□□□□□ -1.61
FCF1-208	ENST00000556814		A1L4Q6	167 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	PSMD9	O00233	223 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	CD3EAP	O15446	510 aa	Known RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	TTLL1	O95922	423 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	PDHA1	P08559	390 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	NR2F6	P10588	404 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	HTR3A	P46098	478 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	MTHFS	P49914	203 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	ITGA8	P53708	1063 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	MAPK10	P53779	464 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	NANOS3	P60323	173 aa	Known RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	PTCHD3	Q3KNS1	767 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	DGKK	Q5KSL6	1271 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	TREML2	Q5T2D2	321 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	ZNF551	Q7Z340	670 aa	Predicted RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	MAVS	Q7Z434	540 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	KCTD20	Q7Z5Y7	419 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	PEG10	Q86TG7	708 aa	Known RBP	4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	TXLNB	Q8N3L3	684 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	SOCS4	Q8WXH5	440 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	GLG1	Q92896	1179 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	RFK	Q969G6	155 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	RSPRY1	Q96DX4	576 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	CHFR	Q96EP1	664 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	PDLIM2	Q96JY6	352 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	SGCZ	Q96LD1	299 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	IKZF4	Q9H2S9	585 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	CERS4	Q9HA82	394 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	ARFGAP3	Q9NP61	516 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	ARHGEF3	Q9NR81	526 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	USP22	Q9UPT9	525 aa		4.98	□□□□□ -1.61
FCF1-208	ENST00000556814	VWC2L	B2RUY7	222 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	HNRNPDL	O14979	420 aa	Known RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	NCK2	O43639	380 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	PEX14	O75381	377 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	PRKCB	P05771	671 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	IL6R	P08887	468 aa	Predicted RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	DLD	P09622	509 aa	Known RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	NDUFB7	P17568	137 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	ADORA2A	P29274	412 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	UQCRC1	P31930	480 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	LIPA	P38571	399 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	RARRES1	P49788	294 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	COPA	P53621	1224 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	PDE1A	P54750	535 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	INHBE	P58166	350 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	STK3	Q13188	491 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	PMS2P11	Q13670	270 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	RRAGB	Q5VZM2	374 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	TOGARAM2	Q6ZUX3	1019 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	MORC1	Q86VD1	984 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	KRT73	Q86Y46	540 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	RP9	Q8TA86	221 aa	Known RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	TMEM171	Q8WVE6	324 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	ZNF566	Q969W8	418 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	LRRC46	Q96FV0	321 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	MPHOSPH6	Q99547	160 aa	Known RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	C17orf80	Q9BSJ5	609 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	SELENOO	Q9BVL4	669 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	INO80B	Q9C086	356 aa	Predicted RBP	4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	FOXJ2	Q9P0K8	574 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	DKK3	Q9UBP4	350 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	DNAJB11	Q9UBS4	358 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	DMRT1	Q9Y5R6	373 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	SNX14	Q9Y5W7	946 aa		4.97	□□□□□ -1.61
FCF1-208	ENST00000556814	SNX2	O60749	519 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	FES	P07332	822 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SETSIP	P0DME0	302 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	HARS	P12081	509 aa	Known RBP	4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	CD19	P15391	556 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	TYRP1	P17643	537 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	GATM	P50440	423 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	PGD	P52209	483 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	TPTE	P56180	551 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	RHBDL3	P58872	404 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SIM1	P81133	766 aa	Predicted RBP	4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SP2	Q02086	613 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	FAM153C	Q494X1	144 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	ANKRD16	Q6P6B7	361 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	MTHFD1L	Q6UB35	978 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	CAND1	Q86VP6	1230 aa	Known RBP	4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	LRRC71	Q8N4P6	559 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	XAGE5	Q8WWM1	108 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	R3HDM4	Q96D70	268 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	ZDHHC12	Q96GR4	267 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SNX27	Q96L92	541 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	FAM227B	Q96M60	508 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	DUSP26	Q9BV47	211 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	DPCD	Q9BVM2	203 aa	Predicted RBP	4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	ZBTB26	Q9HCK0	441 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	TRIM36	Q9NQ86	728 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SERTAD4	Q9NUC0	356 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	SLC17A6	Q9P2U8	582 aa		4.96	□□□□□ -1.62
FCF1-208	ENST00000556814	CCNL1	Q9UK58	526 aa	Predicted RBP	4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms