RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 HPSEQ9Y251 543 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CPQQ9Y646 472 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CFAP54Q96N23 3096 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 DMDP11532 3685 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 ZNF840PA6NDX5 716 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 SCAMP3O14828 347 aaKnown RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 AP1G2O75843 785 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 ZNF202O95125 648 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 RTN3O95197 1032 aaPredicted RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 VNN1O95497 513 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 PFKLP17858 780 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 NR2F2P24468 414 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 HOXC13P31276 330 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 NDST1P52848 882 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 SEC13P55735 322 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 ORC1Q13415 861 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 PUM1Q14671 1186 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 EML3Q32P44 896 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 FBXO43Q4G163 708 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 SPOPLQ6IQ16 392 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 FILIP1Q7Z7B0 1213 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 FAM35AQ86V20 835 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 CCDC150Q8NCX0 1101 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 PDZD8Q8NEN9 1154 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 SMARCD1Q96GM5 515 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 RNF38Q9H0F5 515 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 FBRSL1Q9HCM7 1045 aaKnown RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
SPTLC2-205ENST00000556607 IKBKBO14920 756 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 PAPSS2O95340 614 aaPredicted RBP11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 ADORA2BP29275 332 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC5A3P53794 718 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 CLDN10P78369 228 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 ZXDBP98169 803 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 LMNB2Q03252 620 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 DPYDQ12882 1025 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 ADAM9Q13443 819 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 ZACNQ401N2 412 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 SCAMP5Q8TAC9 235 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 PIEZO1Q92508 2521 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 TAF4BQ92750 862 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 JAKMIP2Q96AA8 810 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 HHIPQ96QV1 700 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 SDCBP2Q9H190 292 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 DMAP1Q9NPF5 467 aaPredicted RBP11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 CFAP97Q9P2B7 532 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 SH3BP1Q9Y3L3 701 aa11.22□□□□□ -0.61
SPTLC2-205ENST00000556607 CACNA1HO95180 2353 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 KIAA1549LQ6ZVL6 1849 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 A0A1W2PQ27 194 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 A0A1W2PQ64 194 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 A0A1W2PQD8 194 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 PRR5-ARHGAP8B1AHC4 643 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC9A3R1O14745 358 aaPredicted RBP11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 AXIN1O15169 862 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 RPP40O75818 363 aaKnown RBP11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 OAS1P00973 400 aaKnown RBP11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 RETP07949 1114 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 TRIM49P0CI25 452 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 TRIM49CP0CI26 452 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 IRF1P10914 325 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 CCDC130P13994 396 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 TCF3P15923 654 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 CD58P19256 250 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 SDHBP21912 280 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 PSMC2P35998 433 aaKnown RBP11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 GCLMP48507 274 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 MAP3K7CLP57077 242 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC7A9P82251 487 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 ARHGAP8P85298 464 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 BECN1Q14457 450 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 HECTD3Q5T447 861 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 INTS8Q75QN2 995 aaKnown RBP11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 TTC30AQ86WT1 665 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 CCDC26Q8TAB7 109 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC2A14Q8TDB8 520 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 OVCA2Q8WZ82 227 aa11.21□□□□□ -0.61
SPTLC2-205ENST00000556607 ACDQ96AP0 544 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms