RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 USP41Q3LFD5 358 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 IL31Q6EBC2 164 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 MB21D2Q8IYB1 491 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CNNM3Q8NE01 707 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 IER2Q9BTL4 223 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 COLEC11Q9BWP8 271 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 PRDM14Q9GZV8 571 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 KLHL25Q9H0H3 589 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CCDC113Q9H0I3 377 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 GP6Q9HCN6 339 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 PRMT8Q9NR22 394 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 WHRNQ9P202 907 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 EBF1Q9UH73 591 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 PIN4Q9Y237 131 aaKnown RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 MSRB2Q9Y3D2 182 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CEP250Q9BV73 2442 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CNTNAP2Q9UHC6 1331 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF292O60281 2723 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 KMT2BQ9UMN6 2715 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 IGKV6-21A0A0C4DH24 114 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 hCG_1984214I3L0E3 225 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 MAN2B1O00754 1011 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SHOXO15266 292 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PDPK1O15530 556 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 CBFA2T2O43439 604 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PRC1O43663 620 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SIGLEC6O43699 453 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SUSD5O60279 629 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SEMA7AO75326 666 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PPM1BO75688 479 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 POMCP01189 267 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 EPHX1P07099 455 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 TDGF1P13385 188 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SFNP31947 248 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 MCM5P33992 734 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 CNR2P34972 360 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 LIMK1P53667 647 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 DLG4P78352 724 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 TEKQ02763 1124 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PTH1RQ03431 593 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 DRP2Q13474 957 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 LPAL2Q16609 132 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 JAKMIP3Q5VZ66 844 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 TPRG1Q6ZUI0 275 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 TMTC3Q6ZXV5 915 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 DPH6Q7L8W6 267 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SPPL2CQ8IUH8 684 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF713Q8N859 430 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 DAGLBQ8NCG7 672 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 CRYGNQ8WXF5 182 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 FGF13Q92913 245 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 INTS4Q96HW7 963 aaKnown RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 MBOAT7Q96N66 472 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PHF20Q9BVI0 1012 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF552Q9H707 407 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 MARCH5Q9NX47 278 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 SUCLA2Q9P2R7 463 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PRG3Q9Y2Y8 225 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF451Q9Y4E5 1061 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
ATXN3-239ENST00000556315 AGRPO00253 132 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 TADA2AO75478 443 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ECI2O75521 394 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 POU2F2P09086 479 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 NCLP19338 710 aaKnown RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 RXRAP19793 462 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 HOXA9P31269 272 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 CIITAP33076 1130 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms