RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 EBF3Q9H4W6 596 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SMYD3Q9H7B4 428 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 FAM92AA1XBS5 289 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 CETN3O15182 167 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 OLFM2O95897 454 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 HLA-DRAP01903 254 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 YWHAQP27348 245 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 TUBP50607 506 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 USP46P62068 366 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 INCA1Q0VD86 236 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 TAF10Q12962 218 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 GAS6Q14393 721 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 PON2Q15165 354 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 DDX42Q86XP3 938 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX6-207ENST00000556303 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
SNX6-207ENST00000556303 CCDC150Q8NCX0 1101 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
SNX6-207ENST00000556303 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
SNX6-207ENST00000556303 ZNF518BQ9C0D4 1074 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 ECT2Q9H8V3 914 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
SNX6-207ENST00000556303 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
SNX6-207ENST00000556303 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
SNX6-207ENST00000556303 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 SLC9A3R1O14745 358 aaPredicted RBP13.38□□□□□ -0.27
SNX6-207ENST00000556303 TNFRSF10BO14763 440 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 CLSTN1O94985 981 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 NFATC1O95644 943 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
SNX6-207ENST00000556303 PPP1R2P41236 205 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 ASPAP45381 313 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 IFNAR2P48551 515 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 EML3Q32P44 896 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
SNX6-207ENST00000556303 KRT39Q6A163 491 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 TRIM68Q6AZZ1 485 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 TTC8Q8TAM2 541 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 RIN3Q8TB24 985 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 CSNK1G1Q9HCP0 422 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
SNX6-207ENST00000556303 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
SNX6-207ENST00000556303 CHURC1-FNTBB4DL54 471 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 LEFTY2O00292 366 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 CLDN5O00501 218 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 SLC16A3O15427 465 aaKnown RBP13.37□□□□□ -0.27
SNX6-207ENST00000556303 ZDHHC11BP0C7U3 371 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 EPB41P11171 864 aaKnown RBP13.37□□□□□ -0.27
SNX6-207ENST00000556303 GJA4P35212 333 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 NDST1P52848 882 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 CACNA2D1P54289 1103 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
SNX6-207ENST00000556303 SATB1Q01826 763 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 ACOT1Q86TX2 421 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 LONP2Q86WA8 852 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 FUKQ8N0W3 1084 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 FBXO32Q969P5 355 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 HNRNPABQ99729 332 aaKnown RBP13.37□□□□□ -0.27
SNX6-207ENST00000556303 TSG101Q99816 390 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 P2RY13Q9BPV8 354 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 PNPLA8Q9NP80 782 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 DNAH14Q0VDD8 3507 aa13.37□□□□□ -0.27
SNX6-207ENST00000556303 K7ESF4 209 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 AP1G2O75843 785 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 ARSAP15289 507 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 PRCPP42785 496 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 GCLMP48507 274 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 GALK1P51570 392 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 SLC5A3P53794 718 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 FOXK2Q01167 660 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 LRRC63Q05C16 580 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 PNOCQ13519 176 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 FSTL4Q6MZW2 842 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 TSSK4Q6SA08 328 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
SNX6-207ENST00000556303 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 SMARCE1Q969G3 411 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 OTUB2Q96DC9 234 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 CHFRQ96EP1 664 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 KCNK16Q96T55 309 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 NIF3L1Q9GZT8 377 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms