RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 PTPN14Q15678 1187 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PKN2Q16513 984 aaKnown RBP6.79□□□□□ -1.32
HIF1A-208ENST00000556237 FBXO47Q5MNV8 452 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 SPOPLQ6IQ16 392 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 ENOSF1Q7L5Y1 443 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 ZNF571Q7Z3V5 609 aaPredicted RBP6.79□□□□□ -1.32
HIF1A-208ENST00000556237 KIAA1328Q86T90 577 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 VPS36Q86VN1 386 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 NT5DC4Q86YG4 428 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 EZH1Q92800 747 aaPredicted RBP6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PPP1R13BQ96KQ4 1090 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 FAM161BQ96MY7 647 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 IMPG2Q9BZV3 1241 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 GPR88Q9GZN0 384 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 APOBEC3GQ9HC16 384 aaKnown RBP6.79□□□□□ -1.32
HIF1A-208ENST00000556237 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 C1orf112Q9NSG2 853 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 DPP3Q9NY33 737 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PADI3Q9ULW8 664 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 AGAP1Q9UPQ3 857 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PCDHB4Q9Y5E5 795 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PCDHB2Q9Y5E7 798 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 PCDHA13Q9Y5I0 950 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 SQORQ9Y6N5 450 aa6.79□□□□□ -1.32
HIF1A-208ENST00000556237 GOLGA6L9A6NEM1 432 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 CAND2O75155 1236 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 RECQL4O94761 1208 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ECEL1O95672 775 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ITGB3P05106 788 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ITGA4P13612 1032 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 KRT5P13647 590 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 IBSPP21815 317 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 TBXAS1P24557 533 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 CTCFP49711 727 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 KIF11P52732 1056 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 GFPT1Q06210 699 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 SOX4Q06945 474 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 PAK2Q13177 524 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 BFSP2Q13515 415 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 CUL2Q13617 745 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 LPIN1Q14693 890 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ZBTB6Q15916 424 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ASTE1Q2TB18 679 aaPredicted RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ZNF667Q5HYK9 610 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 CCDC122Q5T0U0 273 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ALKAL1Q6UXT8 129 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 SLC39A5Q6ZMH5 540 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 FAM71AQ8IYT1 594 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 HACE1Q8IYU2 909 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 USP38Q8NB14 1042 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 BEST2Q8NFU1 509 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 U2AF1L4Q8WU68 220 aaKnown RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 SHC3Q92529 594 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 TAF4BQ92750 862 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 JAKMIP2Q96AA8 810 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 SNX27Q96L92 541 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ZMAT2Q96NC0 199 aaKnown RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 AGPAT1Q99943 283 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ADAM2Q99965 735 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 CXCL16Q9H2A7 254 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 NXF3Q9H4D5 531 aaKnown RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 LZTFL1Q9NQ48 299 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 DERAQ9Y315 318 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 REXO2Q9Y3B8 237 aaKnown RBP6.78□□□□□ -1.32
HIF1A-208ENST00000556237 C2CD2Q9Y426 696 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 IPPQ9Y573 584 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 AK5Q9Y6K8 562 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 THSD7BQ9C0I4 1608 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 SIP14410 1827 aa6.78□□□□□ -1.32
HIF1A-208ENST00000556237 A0A087X0T9 212 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 A0A0U1RQJ8 604 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 SMIM28A0A1B0GU29 152 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 DCDC2CA8MYV0 355 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 ZNF263O14978 683 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 XPOTO43592 962 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 MGEA5O60502 916 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 PQBP1O60828 265 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 LCA5LO95447 670 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 ASS1P00966 412 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 CD4P01730 458 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 WEE2P0C1S8 567 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 FAM228BP0C875 321 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 POLR2BP30876 1174 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 ATICP31939 592 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 BPIFB4P59827 614 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 NOP14P78316 857 aaKnown RBP6.77□□□□□ -1.33
HIF1A-208ENST00000556237 DAB2P98082 770 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 GCNT1Q02742 428 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 KIF5AQ12840 1032 aa6.77□□□□□ -1.33
HIF1A-208ENST00000556237 SLC18A3Q16572 532 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms