RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TRIM49BA6NDI0 452 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 SLC16A3O15427 465 aaKnown RBP19.53■□□□□ 0.72
NEDD1-208ENST00000555806 GADD45BO75293 160 aaPredicted RBP19.53■□□□□ 0.72
NEDD1-208ENST00000555806 PFKLP17858 780 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 CD58P19256 250 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 ADORA2BP29275 332 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
NEDD1-208ENST00000555806 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 ZNF528Q3MIS6 628 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 TSSK4Q6SA08 328 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 ADSSL1Q8N142 457 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 CRYBG2Q8N1P7 616 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 C12orf29Q8N999 325 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 OSCP1Q8WVF1 389 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 SEMA4AQ9H3S1 761 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 PRMT8Q9NR22 394 aaPredicted RBP19.53■□□□□ 0.72
NEDD1-208ENST00000555806 MAN1B1Q9UKM7 699 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 ARHGAP26Q9UNA1 814 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 WNT6Q9Y6F9 365 aa19.53■□□□□ 0.72
NEDD1-208ENST00000555806 PSMA7O14818 248 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 SLC5A3P53794 718 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 INCA1Q0VD86 236 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 PPP2R5DQ14738 602 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 DGKKQ5KSL6 1271 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
NEDD1-208ENST00000555806 CPA6Q8N4T0 437 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 FBXL13Q8NEE6 735 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 PDZD8Q8NEN9 1154 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 TWNKQ96RR1 684 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 DNAI2Q9GZS0 605 aa19.52■□□□□ 0.72
NEDD1-208ENST00000555806 HELZP42694 1942 aaKnown RBP19.52■□□□□ 0.72
NEDD1-208ENST00000555806 MYO15AQ9UKN7 3530 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 OTOL1A6NHN0 477 aaPredicted RBP19.51■□□□□ 0.71
NEDD1-208ENST00000555806 LMNAP02545 664 aaKnown RBP19.51■□□□□ 0.71
NEDD1-208ENST00000555806 FAM200BP0CF97 657 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 CCR3P51677 355 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 MAP3K7CLP57077 242 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 AMPD2Q01433 879 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 WDR44Q5JSH3 913 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 KLHL10Q6JEL2 608 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 ZC3H3Q8IXZ2 948 aaKnown RBP19.51■□□□□ 0.71
NEDD1-208ENST00000555806 SCAMP5Q8TAC9 235 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 SEMA4DQ92854 862 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 ATP2A3Q93084 1043 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 SMOQ99835 787 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 RAB20Q9NX57 234 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 SMPD4Q9NXE4 827 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 CPQQ9Y646 472 aa19.51■□□□□ 0.71
NEDD1-208ENST00000555806 USP34Q70CQ2 3546 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 LEFTY2O00292 366 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 CILPO75339 1184 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 MBL2P11226 248 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-208ENST00000555806 TCF3P15923 654 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 PPP1R2P41236 205 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 MCCD1P59942 119 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-208ENST00000555806 SLC7A9P82251 487 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 GAS6Q14393 721 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 Q6ZS52 159 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 ZMIZ2Q8NF64 920 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 ATRIPQ8WXE1 791 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 OVCA2Q8WZ82 227 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 JAKMIP2Q96AA8 810 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-208ENST00000555806 RNF38Q9H0F5 515 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 ECT2Q9H8V3 914 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 ZSCAN32Q9NX65 697 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 ARMCX3Q9UH62 379 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-208ENST00000555806 CHORDC1Q9UHD1 332 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-208ENST00000555806 PCDHGA2Q9Y5H1 932 aa19.5■□□□□ 0.71
NEDD1-208ENST00000555806 BIN1O00499 593 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 TNFRSF10BO14763 440 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 BEST1O76090 585 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 OAS1P00973 400 aaKnown RBP19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CD44P16070 742 aaKnown RBP19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CXCL12P48061 93 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 SATB1Q01826 763 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 GRSF1Q12849 480 aaKnown RBP eCLIP19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CCINQ13939 588 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 EML3Q32P44 896 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 ZNF394Q53GI3 561 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 SPEM1Q8N4L4 309 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 CYFIP2Q96F07 1278 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 HNRNPABQ99729 332 aaKnown RBP19.49■□□□□ 0.71
NEDD1-208ENST00000555806 COMMD8Q9NX08 183 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 GMIPQ9P107 970 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 MYH10P35580 1976 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 FANCMQ8IYD8 2048 aa19.49■□□□□ 0.71
NEDD1-208ENST00000555806 NFATC1O95644 943 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 OLFM2O95897 454 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 GJA4P35212 333 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 ZXDBP98169 803 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 NR1H3Q13133 447 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 CCDC40Q4G0X9 1142 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 TMEM196Q5HYL7 178 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 HECTD3Q5T447 861 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 MAMSTRQ6ZN01 415 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms