RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ARL14EPQ8N8R7 260 aaPredicted RBP12.57□□□□□ -0.4
VRK1-204ENST00000555351 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
VRK1-204ENST00000555351 NIF3L1Q9GZT8 377 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 SDCBP2Q9H190 292 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 PNPLA8Q9NP80 782 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 TMEM30AQ9NV96 361 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 R4GN57 208 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 F5P12259 2224 aa12.57□□□□□ -0.4
VRK1-204ENST00000555351 USP34Q70CQ2 3546 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CACNA1IQ9P0X4 2223 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
VRK1-204ENST00000555351 CLSTN1O94985 981 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 OAS1P00973 400 aaKnown RBP12.56□□□□□ -0.4
VRK1-204ENST00000555351 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CXCL12P48061 93 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 SOX9P48436 509 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 GCLMP48507 274 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 TNK2Q07912 1038 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 TAF10Q12962 218 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 STIM1Q13586 685 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 TXNDC11Q6PKC3 985 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 SCARA5Q6ZMJ2 495 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 ADSSL1Q8N142 457 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 FBXL13Q8NEE6 735 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 TAS1R2Q8TE23 839 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
VRK1-204ENST00000555351 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
VRK1-204ENST00000555351 NT5C1AQ9BXI3 368 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 FBXO44Q9H4M3 255 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 EBF3Q9H4W6 596 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
VRK1-204ENST00000555351 COQ4Q9Y3A0 265 aa12.56□□□□□ -0.4
VRK1-204ENST00000555351 CLDN5O00501 218 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 PSMA7O14818 248 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 ATG13O75143 517 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 CILPO75339 1184 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 AP1G2O75843 785 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 NFATC1O95644 943 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 ZDHHC11BP0C7U3 371 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 TRIM49P0CI25 452 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 TRIM49CP0CI26 452 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 DRD1P21728 446 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 CNR2P34972 360 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 IFNAR2P48551 515 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 MXI1P50539 228 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
VRK1-204ENST00000555351 PON2Q15165 354 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 EML3Q32P44 896 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 FBXO43Q4G163 708 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
VRK1-204ENST00000555351 SUMF1Q8NBK3 374 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 RIN3Q8TB24 985 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 APOBEC3GQ9HC16 384 aaKnown RBP12.55□□□□□ -0.4
VRK1-204ENST00000555351 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
VRK1-204ENST00000555351 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
VRK1-204ENST00000555351 MYO15AQ9UKN7 3530 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 CCDC163A0A0D9SF12 145 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 E2F8A0AVK6 867 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
VRK1-204ENST00000555351 CHURC1-FNTBB4DL54 471 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 PMM2O15305 246 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 GJA4P35212 333 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 SLC5A3P53794 718 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 GAS6Q14393 721 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 WDR44Q5JSH3 913 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 HECTD3Q5T447 861 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 ANKRD40Q6AI12 368 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 TRIM68Q6AZZ1 485 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 RUBCNQ92622 972 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 RNF38Q9H0F5 515 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 TBC1D14Q9P2M4 693 aa12.54□□□□□ -0.4
VRK1-204ENST00000555351 LEFTY2O00292 366 aa12.53□□□□□ -0.4
VRK1-204ENST00000555351 ARSAP15289 507 aa12.53□□□□□ -0.4
VRK1-204ENST00000555351 FSTL4Q6MZW2 842 aa12.53□□□□□ -0.4
VRK1-204ENST00000555351 GPR161Q8N6U8 529 aaKnown RBP12.53□□□□□ -0.4
VRK1-204ENST00000555351 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
VRK1-204ENST00000555351 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms