RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ALG1LQ6GMV1 187 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PKN3Q6P5Z2 889 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PLEKHM3Q6ZWE6 761 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CD163Q86VB7 1156 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 VSIG10LQ86VR7 867 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RNF135Q8IUD6 432 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CMTR2Q8IYT2 770 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CENPIQ92674 756 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 EDAQ92838 391 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CASP10Q92851 521 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NAF1Q96HR8 494 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 C8orf76Q96K31 380 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PPP1R16BQ96T49 567 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 FAM129BQ96TA1 746 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RHOXF2Q9BQY4 288 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TSGA10Q9BZW7 698 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 WNT5BQ9H1J7 359 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 VPS11Q9H270 941 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ATP13A1Q9HD20 1204 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PXMP2Q9NR77 195 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 HAUS2Q9NVX0 235 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PCDHGB4Q9UN71 923 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 AP1M2Q9Y6Q5 423 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TRAV6A0A075B6T7 132 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LCHNA4D1U4 455 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 CTAGE9A4FU28 777 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 K7EPI3 171 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ZW10O43264 779 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ACSL4O60488 711 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 TSC22D2O75157 780 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 C1RP00736 705 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 HSPD1P10809 573 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 HSD3B1P14060 373 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 RPS2P15880 293 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LPOP22079 712 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LTBRP36941 435 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 GRIK1P39086 918 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 HAAOP46952 286 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 DIO1P49895 249 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 DEFB103AP81534 67 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 PPFIA1Q13136 1202 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ADAM15Q13444 863 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 BMPR2Q13873 1038 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 KCNC3Q14003 757 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 SURF1Q15526 300 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 GEN1Q17RS7 908 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MCMDC2Q4G0Z9 681 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 EPC2Q52LR7 807 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 KRTCAP3Q53RY4 240 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 FOXB2Q5VYV0 432 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 TTBK2Q6IQ55 1244 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 PTCRAQ6ISU1 281 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM154Q6P9G4 183 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 CLEC2AQ6UVW9 174 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MEX3BQ6ZN04 569 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 USP51Q70EK9 711 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 KCTD1Q719H9 257 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 PDZD4Q76G19 769 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 NANOGNBQ7Z5D8 188 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 CAND1Q86VP6 1230 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 NLRP8Q86W28 1048 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 BPHLQ86WA6 291 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM192Q8IY95 271 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 EFHBQ8N7U6 833 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 AVL9Q8NBF6 648 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ATP8B4Q8TF62 1192 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ARNTL2Q8WYA1 636 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 SEPT1Q8WYJ6 367 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 SUSD6Q92537 303 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 SEPT8Q92599 483 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 RUBCNQ92622 972 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 VPS39Q96JC1 886 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 DMRTB1Q96MA1 342 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 NECAB3Q96P71 396 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 INPP4AQ96PE3 977 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 TACO1Q9BSH4 297 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 DSCC1Q9BVC3 393 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 PHF20Q9BVI0 1012 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LSM14BQ9BX40 385 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MRPL46Q9H2W6 279 aaKnown RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MMADHCQ9H3L0 296 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 RIOX1Q9H6W3 641 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MMRN2Q9H8L6 949 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 COL20A1Q9P218 1284 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 HDAC6Q9UBN7 1215 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 RAPGEFL1Q9UHV5 662 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ADGRE2Q9UHX3 823 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 ZMYM5Q9UJ78 669 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 POLHQ9Y253 713 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 PKD1L2Q7Z442 2459 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 A0A0G2JPF8 293 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-206ENST00000554429 CDC14CA4D256 554 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 RGSL1A5PLK6 1076 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 A6NHS1 94 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 SPATA31C2B4DYI2 1134 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 HNRNPCL3B7ZW38 293 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 MEN1O00255 615 aa2.87□□□□□ -1.95
PRPF39-206ENST00000554429 LSM1O15116 133 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms