RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 STRNO43815 780 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 ENDOD1O94919 500 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 STAU1O95793 577 aaKnown RBP12.78□□□□□ -0.36
LRP1-207ENST00000554174 RBP3P10745 1247 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
LRP1-207ENST00000554174 FOXN2P32314 431 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 PCK1P35558 622 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 CDH6P55285 790 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 DPYSL3Q14195 570 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 ACAP1Q15027 740 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 KYAT1Q16773 422 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 CGB2Q6NT52 195 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 CEP128Q6ZU80 1094 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
LRP1-207ENST00000554174 ZC3H18Q86VM9 953 aaKnown RBP12.78□□□□□ -0.36
LRP1-207ENST00000554174 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 PPIL6Q8IXY8 311 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 NPLOC4Q8TAT6 608 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRP1-207ENST00000554174 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 GPATCH2LQ9NWQ4 482 aa12.78□□□□□ -0.36
LRP1-207ENST00000554174 A0A1W2PPM1 405 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 GPR32O75388 356 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 TFE3P19532 575 aaPredicted RBP12.77□□□□□ -0.36
LRP1-207ENST00000554174 IL4RP24394 825 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 STX2P32856 288 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 ACVR2BQ13705 512 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 GRB14Q14449 540 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 HIC1Q14526 733 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 PKDCCQ504Y2 493 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 ZC3H12AQ5D1E8 599 aaKnown RBP12.77□□□□□ -0.36
LRP1-207ENST00000554174 PRAMEF19Q5SWL8 479 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 OLFML1Q6UWY5 402 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 TDRPQ86YL5 185 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 C4orf33Q8N1A6 199 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 GTF3C2Q8WUA4 911 aaPredicted RBP12.77□□□□□ -0.36
LRP1-207ENST00000554174 LRRN4Q8WUT4 740 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.36
LRP1-207ENST00000554174 OSMRQ99650 979 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 ACTR5Q9H9F9 607 aaPredicted RBP12.77□□□□□ -0.36
LRP1-207ENST00000554174 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 ACTL7BQ9Y614 415 aa12.77□□□□□ -0.36
LRP1-207ENST00000554174 DGKDQ16760 1214 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 RIBC1Q8N443 379 aaPredicted RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 LENG1Q96BZ8 264 aaPredicted RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 FRMD8P1Q9BZ68 369 aaPredicted RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 RSAD1Q9HA92 442 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 NKIRAS1Q9NYS0 192 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 MORF4L1Q9UBU8 362 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 GRID1Q9ULK0 1009 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
LRP1-207ENST00000554174 DOCK3Q8IZD9 2030 aa12.77□□□□□ -0.37
LRP1-207ENST00000554174 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 RASSF9O75901 435 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 MAP3K6O95382 1288 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 AKAP5P24588 427 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 ZBTB6Q15916 424 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 CA9Q16790 459 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 ARHGEF18Q6ZSZ5 1173 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 C3orf62Q6ZUJ4 267 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 TRPM8Q7Z2W7 1104 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 PCGF5Q86SE9 256 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 DENND1AQ8TEH3 1009 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 SNX27Q96L92 541 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 PTPN18Q99952 460 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 PAIP2Q9BPZ3 127 aaKnown RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 TRABDQ9H4I3 376 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 SLC40A1Q9NP59 571 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 HAUS2Q9NVX0 235 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.76□□□□□ -0.374e-7■■□□□ 13.9
LRP1-207ENST00000554174 XPO7Q9UIA9 1087 aaKnown RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 KIAA1257Q9ULG3 409 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 MCF2LO15068 1137 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 PAPSS1O43252 624 aaPredicted RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 PRPSAP2O60256 369 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 KRT15P19012 456 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 TAC1P20366 129 aa12.76□□□□□ -0.37
LRP1-207ENST00000554174 RPA3P35244 121 aaPredicted RBP12.76□□□□□ -0.37
LRP1-207ENST00000554174 GTF2A2P52657 109 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms