RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TWF2Q6IBS0 349 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLC15A4Q8N697 577 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 Q8N9G6 341 aaPredicted RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 JDP2Q8WYK2 163 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CD101Q93033 1021 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 DOK1Q99704 481 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 THAP2Q9H0W7 228 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 C12orf65Q9H3J6 166 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 RPF2Q9H7B2 306 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 SMYD3Q9H7B4 428 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 C10orf88Q9H8K7 445 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 KCNK4Q9NYG8 393 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ANKMY1Q9P2S6 941 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLC17A7Q9P2U7 560 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 PPARGC1AQ9UBK2 798 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 GTF3C4Q9UKN8 822 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 POMPQ9Y244 141 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 PRR5-ARHGAP8B1AHC4 643 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLC26A4O43511 780 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CAPNS1P04632 268 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 DLATP10515 647 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 PLS3P13797 630 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ATF2P15336 505 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 RRM1P23921 792 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 S100A5P33763 92 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 BMPR1AP36894 532 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 MAGEA4P43358 317 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 HSPA13P48723 471 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 THOP1P52888 689 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ARHGAP8P85298 464 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 KRT76Q01546 638 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 HSPA14Q0VDF9 509 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TROAPQ12815 778 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 GRB10Q13322 594 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 PFKFB3Q16875 520 aaPredicted RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 CDONQ4KMG0 1287 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CYP4F22Q6NT55 531 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SV2BQ7L1I2 683 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 DYMQ7RTS9 669 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 LYSMD3Q7Z3D4 306 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 IGFN1Q86VF2 1251 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TMEM126BQ8IUX1 230 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 GLYCTKQ8IVS8 523 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 MYO1HQ8N1T3 1032 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CATSPER1Q8NEC5 780 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 GRIN3AQ8TCU5 1115 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 RASGRP4Q8TDF6 673 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TCP10LQ8TDR4 215 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ACMSDQ8TDX5 336 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SNX29Q8TEQ0 813 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 WNK4Q96J92 1243 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ALPK1Q96QP1 1244 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TCF12Q99081 682 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 FERMT1Q9BQL6 677 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 HOXD1Q9GZZ0 328 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 MRGBPQ9NV56 204 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 RIC8BQ9NVN3 520 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ZMAT5Q9UDW3 170 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 RIMS3Q9UJD0 308 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 AGO2Q9UKV8 859 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CPQQ9Y646 472 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 PSMD11O00231 422 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 FKBP9O95302 570 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 H6PDO95479 791 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 NR4A1P22736 598 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 CALML3P27482 149 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 ETV3P41162 512 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 CLK3P49761 638 aaKnown RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 STAT2P52630 851 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 TXNL4AP83876 142 aaKnown RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 TCEAL1Q15170 157 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 TRIP13Q15645 432 aaPredicted RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 CCDC142Q17RM4 750 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 ZBED5Q49AG3 693 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 BOLA3Q53S33 107 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 RALGPS1Q5JS13 557 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 RARS2Q5T160 578 aaKnown RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 ANKRD26P1Q6NSI1 321 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 UBE2Q1Q7Z7E8 422 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 HEATR4Q86WZ0 1026 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 GALNT13Q8IUC8 556 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 NATD1Q8N6N6 113 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 CCDC89Q8N998 374 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 MZB1Q8WU39 189 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 C1orf54Q8WWF1 131 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 RNF38Q9H0F5 515 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 RPAP3Q9H6T3 665 aaPredicted RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 MARCH7Q9H992 704 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 ACP6Q9NPH0 428 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 THAP1Q9NVV9 213 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 DNMT3BQ9UBC3 853 aaKnown RBP9.93□□□□□ -0.82
SIX4-202ENST00000554079 CDH22Q9UJ99 828 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 CDC14AQ9UNH5 594 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 GLI3P10071 1580 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms