RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SPATA18Q8TC71 538 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF419Q96HQ0 510 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 FUBP3Q96I24 572 aaKnown RBP eCLIP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 HSPA12BQ96MM6 686 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 PNKPQ96T60 521 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 DUSP9Q99956 384 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 ACBD6Q9BR61 282 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 KCND2Q9NZV8 630 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 ANKRD63C9JTQ0 380 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ATXN7O15265 892 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 SEC24BO95487 1268 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 HDCP19113 662 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 NDUFV2P19404 249 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 PRPHP41219 470 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ACOT2P49753 483 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 LIG4P49917 911 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ATXN3P54252 364 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 RPL10AP62906 217 aaKnown RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 TSPY1Q01534 308 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 POU5F1Q01860 360 aaKnown RBP9.73□□□□□ -0.85
PRKCH-208ENST00000553846 KCNB1Q14721 858 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 FAM171BQ6P995 826 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 PCSK4Q6UW60 755 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 TTC30AQ86WT1 665 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 TRIML1Q8N9V2 468 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 DNASE2BQ8WZ79 361 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 SPATA17Q96L03 361 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 REEP2Q9BRK0 252 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 MSTO1Q9BUK6 570 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 IKZF4Q9H2S9 585 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ARHGEF4Q9NR80 690 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 TMEM30AQ9NV96 361 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 KCNG1Q9UIX4 513 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 PCDHB6Q9Y5E3 794 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 BSNQ9UPA5 3926 aa9.73□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF840PA6NDX5 716 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 H0YCG3 227 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 HOXC11O43248 304 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 APODP05090 189 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 SYPP08247 313 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 ADH5P11766 374 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 SCP2P22307 547 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 ADSSP30520 456 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 GTF2BQ00403 316 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 KDSRQ06136 332 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 RESTQ13127 1097 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 TRIM29Q14134 588 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 ANKRD1Q15327 319 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 SV2CQ496J9 727 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF843Q8N446 348 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 BICD1Q96G01 975 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 CEP295NLQ96MC4 621 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 PRORYQ9H606 182 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 IL21RQ9HBE5 538 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 DDX43Q9NXZ2 648 aaKnown RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 APOBEC2Q9Y235 224 aaKnown RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 NFE2L3Q9Y4A8 694 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 BOD1L1Q8NFC6 3051 aa9.72□□□□□ -0.85
PRKCH-208ENST00000553846 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-208ENST00000553846 MYMKA6NI61 221 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 TRIM24O15164 1050 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 GREM1O60565 184 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 ATP2C2O75185 946 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
PRKCH-208ENST00000553846 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 ANAPC15P60006 121 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 NOP14P78316 857 aaKnown RBP9.71□□□□□ -0.86
PRKCH-208ENST00000553846 CYP4F3Q08477 520 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 C19orf57Q0VDD7 668 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 PTPRNQ16849 979 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 LY6G5CQ5SRR4 150 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 EGFLAMQ63HQ2 1017 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 TMEM86AQ8N2M4 240 aa9.71□□□□□ -0.86
PRKCH-208ENST00000553846 ZNF513Q8N8E2 541 aaPredicted RBP9.71□□□□□ -0.86
PRKCH-208ENST00000553846 FSIP1Q8NA03 581 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 461.1 ms