RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 DDX6P26196 483 aaKnown RBP eCLIP14.61□□□□□ -0.07
TUBB3-202ENST00000553656 CCR2P41597 374 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 JAM2P57087 298 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 USP46P62068 366 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 TAF10Q12962 218 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 MEA1Q16626 185 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 GPR158Q5T848 1215 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 GAREM2Q75VX8 874 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 SIX6OS1Q8N1H7 587 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 SECISBP2LQ93073 1101 aaKnown RBP14.61□□□□□ -0.07
TUBB3-202ENST00000553656 MCRS1Q96EZ8 462 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 MYADMQ96S97 322 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 ZSWIM1Q9BR11 485 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 IL21Q9HBE4 155 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 ACP6Q9NPH0 428 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 ZMYM5Q9UJ78 669 aa14.61□□□□□ -0.07
TUBB3-202ENST00000553656 TNFRSF10BO14763 440 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 ABL1P00519 1130 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 F11P03951 625 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 LAMP2P13473 410 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 CLCN1P35523 988 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 PLA2G4AP47712 749 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 CYP4F8P98187 520 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 ARID5AQ03989 594 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 FIGNQ5HY92 759 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 SARM1Q6SZW1 724 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 MTSS1LQ765P7 747 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 ZDHHC14Q8IZN3 488 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-202ENST00000553656 OVCA2Q8WZ82 227 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 NOX5Q96PH1 765 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 UHRF1Q96T88 793 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-202ENST00000553656 EDEM3Q9BZQ6 932 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 TASP1Q9H6P5 420 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 TRPC7Q9HCX4 862 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 TLR8Q9NR97 1041 aaKnown RBP14.6□□□□□ -0.07
TUBB3-202ENST00000553656 EPS15L1Q9UBC2 864 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 MYO6Q9UM54 1294 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.6□□□□□ -0.07
TUBB3-202ENST00000553656 PRUNE2Q8WUY3 3088 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 ITIH6Q6UXX5 1313 aa14.6□□□□□ -0.07
TUBB3-202ENST00000553656 LOC730098B7Z3J9 87 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 HHLA1C9JL84 531 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 MOSPD3O75425 235 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 TPM1P09493 284 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 FERP16591 822 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 PBX1P40424 430 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 TKTL1P51854 596 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 KIF11P52732 1056 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 PKDCCQ504Y2 493 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 TAF3Q5VWG9 929 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 DENND1BQ6P3S1 775 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 GPRIN1Q7Z2K8 1008 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 GAS2L3Q86XJ1 694 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 ZNF677Q86XU0 584 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 PASD1Q8IV76 773 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 GJD3Q8N144 294 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 EPS8L1Q8TE68 723 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 KCTD13Q8WZ19 329 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 HSFY1Q96LI6 401 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 ST7Q9NRC1 585 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 GMIPQ9P107 970 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 PCDHGC3Q9UN70 934 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 SCML2Q9UQR0 700 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 NCANO14594 1321 aa14.59□□□□□ -0.07
TUBB3-202ENST00000553656 TCF20Q9UGU0 1960 aaKnown RBP14.58□□□□□ -0.07
TUBB3-202ENST00000553656 PATJQ8NI35 1801 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 TRAV19A0A0A6YYK7 116 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 SOBPA7XYQ1 873 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 LCP1P13796 627 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 AVPR1AP37288 418 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 ACADSBP45954 432 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 RGS7P49802 495 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 SNX16P57768 344 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 ADIGQ0VDE8 80 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 TRIM14Q14142 442 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 ASIC2Q16515 512 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 SPECC1LQ69YQ0 1117 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 TMEM150AQ86TG1 271 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.08
TUBB3-202ENST00000553656 GPIHBP1Q8IV16 184 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 ARHGAP18Q8N392 663 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 MAB21L3Q8N8X9 362 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 TMEM35BQ8NCS4 154 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
TUBB3-202ENST00000553656 SLC35F5Q8WV83 523 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 NECAB3Q96P71 396 aaPredicted RBP14.58□□□□□ -0.08
TUBB3-202ENST00000553656 NACA2Q9H009 215 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.08
TUBB3-202ENST00000553656 LHX5Q9H2C1 402 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 IL37Q9NZH6 218 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 LIMD1Q9UGP4 676 aa14.58□□□□□ -0.08
TUBB3-202ENST00000553656 A0A1W2PQJ5 194 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 FAM92AA1XBS5 289 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 ZNF840PA6NDX5 716 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 LRRC53A6NM62 1247 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms