RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 C2CD2Q9Y426 696 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 BZW2Q9Y6E2 419 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 A0A0U1RQF3 1178 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TTC26A0AVF1 554 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ARHGEF37A1IGU5 675 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PQBP1O60828 265 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 EFCAB14O75071 495 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PAGE1O75459 146 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 OFD1O75665 1012 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 THP07101 528 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CLTBP09497 229 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 FAM163BP0C2L3 166 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 GHRP10912 638 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SLC9A1P19634 815 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 MSNP26038 577 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PON1P27169 355 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 GNA15P30679 374 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CD52P31358 61 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CYLC1P35663 651 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TNFSF9P41273 254 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 STAT1P42224 750 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 BPIFB4P59827 614 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 POLR2FP61218 127 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 OSTNP61366 133 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 DLG4P78352 724 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 RBP5P82980 135 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TFAMQ00059 246 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TLE2Q04725 743 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PPP3CAQ08209 521 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 MYO1EQ12965 1108 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 LPIN1Q14693 890 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM132DQ14C87 1099 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SLC10A6Q3KNW5 377 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ZACNQ401N2 412 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 KLHDC7AQ5VTJ3 777 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SFMBT2Q5VUG0 894 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CYP26C1Q6V0L0 522 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SLC24A5Q71RS6 500 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TRAPPC11Q7Z392 1133 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 VPS36Q86VN1 386 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CDR2LQ86X02 465 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SPACA3Q8IXA5 215 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM199Q8N511 208 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 GRIN3AQ8TCU5 1115 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM40Q8WWA1 233 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ASB11Q8WXH4 323 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 DHX38Q92620 1227 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ADAM2Q99965 735 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 CRACR2AQ9BSW2 395 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 HTATIP2Q9BUP3 242 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 IFIH1Q9BYX4 1025 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 OSBPL7Q9BZF2 842 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 HAPLN2Q9GZV7 340 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 HIPK3Q9H422 1215 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 UBE2TQ9NPD8 197 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 LUC7LQ9NQ29 371 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PRDM5Q9NQX1 630 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 RGS18Q9NS28 235 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 FAM207AQ9NSI2 230 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 DPP3Q9NY33 737 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 GCNT4Q9P109 453 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 DNAJC12Q9UKB3 198 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ITGA11Q9UKX5 1188 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 UBQLN1Q9UMX0 589 aaKnown RBP5.37□□□□□ -1.55
VTI1B-202ENST00000553619 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 IPPQ9Y573 584 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PCDHB7Q9Y5E2 793 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 PCDHB2Q9Y5E7 798 aa5.37□□□□□ -1.55
VTI1B-202ENST00000553619 TRIP11Q15643 1979 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 ENPP3O14638 875 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 ARHGAP6O43182 974 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 FAM189A1O60320 539 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 MFAP3LO75121 409 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 CLSTN1O94985 981 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
VTI1B-202ENST00000553619 TIMP1P01033 207 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 HLA-DRAP01903 254 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 GYPCP04921 128 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 EDN1P05305 212 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 PFKMP08237 780 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 KRT19P08727 400 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 CELA3AP09093 270 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 TRIM49P0CI25 452 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 TRIM49CP0CI26 452 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 CXCL8P10145 99 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 ACTN1P12814 892 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 UCHL3P15374 230 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 KCNE1P15382 129 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 RAG1P15918 1043 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 FERP16591 822 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 HNRNPH3P31942 346 aaKnown RBP5.36□□□□□ -1.55
VTI1B-202ENST00000553619 RPL9P32969 192 aaKnown RBP5.36□□□□□ -1.55
VTI1B-202ENST00000553619 PNPLA4P41247 253 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 PIK3CAP42336 1068 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 ADKP55263 362 aaKnown RBP5.36□□□□□ -1.55
VTI1B-202ENST00000553619 ETF1P62495 437 aaKnown RBP5.36□□□□□ -1.55
VTI1B-202ENST00000553619 KRT83P78385 493 aa5.36□□□□□ -1.55
VTI1B-202ENST00000553619 FAM189BP81408 668 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms