RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PLK5Q496M5 336 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 TMEM196Q5HYL7 178 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 CENPPQ6IPU0 288 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 FSTL4Q6MZW2 842 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 CACNA2D4Q7Z3S7 1137 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 APBB1IPQ7Z5R6 666 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-219ENST00000553488 WASF1Q92558 559 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 GTF3C6Q969F1 213 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 PSMG2Q969U7 264 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 IFT74Q96LB3 600 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 PGLYRP2Q96PD5 576 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 TARS2Q9BW92 718 aaKnown RBP7.92□□□□□ -1.14
ATXN3-219ENST00000553488 MRPL4Q9BYD3 311 aaKnown RBP7.92□□□□□ -1.14
ATXN3-219ENST00000553488 BHMT2Q9H2M3 363 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 HPS4Q9NQG7 708 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 HELZ2Q9BYK8 2649 aaKnown RBP7.92□□□□□ -1.14
ATXN3-219ENST00000553488 APC2O95996 2303 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 OTOL1A6NHN0 477 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 K7ERI5 159 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 GIPC1O14908 333 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 JAK2O60674 1132 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 FAM13AO94988 1023 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 OR52Z1P0C646 297 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 LRPAP1P30533 357 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 MCM7P33993 719 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 MCM2P49736 904 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 PEX3P56589 373 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 CYP4F8P98187 520 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 YWHAHQ04917 246 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 ST3GAL1Q11201 340 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 DUSP4Q13115 394 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 NOLC1Q14978 699 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 SLC10A6Q3KNW5 377 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 ITPRIPL2Q3MIP1 535 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 GPR158Q5T848 1215 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 HAUS3Q68CZ6 603 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 MPZL3Q6UWV2 235 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 NSUN7Q8NE18 718 aaKnown RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 RIN3Q8TB24 985 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 BPIFB1Q8TDL5 484 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 GATA6Q92908 595 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 ACAP3Q96P50 834 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 TMEM209Q96SK2 561 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 FAM83CQ9BQN1 747 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 EDEM2Q9BV94 578 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 DUSP15Q9H1R2 295 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 VPS45Q9NRW7 570 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 POLR3BQ9NW08 1133 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 TIMM13Q9Y5L4 95 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-219ENST00000553488 ADAMTS9Q9P2N4 1935 aa7.91□□□□□ -1.14
ATXN3-219ENST00000553488 ASH1LQ9NR48 2969 aaKnown RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 MYOFQ9NZM1 2061 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 LNP1A1A4G5 178 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 OR6C75A6NL08 312 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 TRDMT1O14717 391 aaKnown RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 PPEF2O14830 753 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ICMTO60725 284 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ADAM23O75077 832 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HIP1RO75146 1068 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 DEAF1O75398 565 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 SOAT2O75908 522 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 GHRHP01286 108 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 CCDC192P0DO97 292 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 CXCL8P10145 99 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HARSP12081 509 aaKnown RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ATF6P18850 670 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 GABRR2P28476 465 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 NOVA1P51513 510 aaKnown RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 EPHB3P54753 998 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HYAL2Q12891 473 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 DMP1Q13316 513 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ORC2Q13416 577 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 MYBPC2Q14324 1141 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ZBTB6Q15916 424 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ME3Q16798 604 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 SEZ6Q53EL9 994 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 TTC39BQ5VTQ0 682 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HAUS6Q7Z4H7 955 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 DNAJB7Q7Z6W7 309 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 NECAB1Q8N987 351 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ATAD1Q8NBU5 361 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ERMNQ8TAM6 284 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 EZH1Q92800 747 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ZBTB45Q96K62 511 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-219ENST00000553488 RUSC1Q9BVN2 902 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HAPLN2Q9GZV7 340 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 HSFX1Q9UBD0 423 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 SALL4Q9UJQ4 1053 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ASB3Q9Y575 518 aa7.9□□□□□ -1.14
ATXN3-219ENST00000553488 ADAMTS20P59510 1910 aa7.9□□□□□ -1.15
ATXN3-219ENST00000553488 KALRNO60229 2985 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 FLNBO75369 2602 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms