RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CDH9Q9ULB4 789 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 ATP8B3O60423 1300 aa10.58□□□□□ -0.71
ACTN1-208ENST00000553370 CHD6Q8TD26 2715 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 IGF2RP11717 2491 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 C2orf78A6NCI8 922 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 OTOL1A6NHN0 477 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-208ENST00000553370 HCRTO43612 131 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 PHACTR2O75167 634 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 TADA3O75528 432 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF806P0C7X5 589 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 HOXC13P31276 330 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 MAGEA11P43364 429 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 CYP2J2P51589 502 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 WNT7BP56706 349 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 AMPD3Q01432 767 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 RESTQ13127 1097 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 TRPC3Q13507 836 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 CCDC142Q17RM4 750 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 USP39Q53GS9 565 aaKnown RBP10.58□□□□□ -0.72
ACTN1-208ENST00000553370 C2orf27AQ580R0 203 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 MDH1BQ5I0G3 518 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 STPG1Q5TH74 334 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 VSTM1Q6UX27 236 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 DENND5BQ6ZUT9 1274 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 OR6B3Q8NGW1 331 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 SLITRK1Q96PX8 696 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 EDEM2Q9BV94 578 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 TPSD1Q9BZJ3 242 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 NACA2Q9H009 215 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 KIAA1586Q9HCI6 787 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 INTS13Q9NVM9 706 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 ANGPTL2Q9UKU9 493 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 PCDHGA5Q9Y5G8 931 aa10.58□□□□□ -0.72
ACTN1-208ENST00000553370 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
ACTN1-208ENST00000553370 SLC9A3R1O14745 358 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ATP2C2O75185 946 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ALDH1A2O94788 518 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 MBL2P11226 248 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SYT1P21579 422 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 LIMK1P53667 647 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SOWAHAQ2M3V2 549 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 EML3Q32P44 896 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 NAIF1Q69YI7 327 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 DDX42Q86XP3 938 aaKnown RBP eCLIP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 WDR49Q8IV35 697 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 OR5B17Q8NGF7 314 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 DHX58Q96C10 678 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SPACA7Q96KW9 195 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 MYRFLQ96LU7 910 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 USP28Q96RU2 1077 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SLC22A12Q96S37 553 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 MED10Q9BTT4 135 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 FGFBP2Q9BYJ0 223 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 TNMDQ9H2S6 317 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ZSCAN16Q9H4T2 348 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 POLR3BQ9NW08 1133 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SMPD4Q9NXE4 827 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 RABGEF1Q9UJ41 708 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 ARHGAP26Q9UNA1 814 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 CACNA1EQ15878 2313 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
ACTN1-208ENST00000553370 F8VP50 259 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 LEFTY2O00292 366 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 SCAMP3O14828 347 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 KRT37O76014 449 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 CAVIN2O95810 425 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 ADH1CP00326 375 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 APODP05090 189 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 PFKLP17858 780 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 TRIM21P19474 475 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 WARSP23381 471 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 RAP1GAPP47736 663 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 PPP3CCP48454 512 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 KDSRQ06136 332 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 BIRC3Q13489 604 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 CUL4AQ13619 759 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 SNRNP35Q16560 246 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 PLK5Q496M5 336 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 DAB2IPQ5VWQ8 1189 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 TCEAL6Q6IPX3 200 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 DPH6Q7L8W6 267 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms