RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 SLC7A9P82251 487 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 DHCR24Q15392 516 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 GAB4Q2WGN9 574 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 SFTPA1Q8IWL2 248 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 ADGRG2Q8IZP9 1017 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 TSTD1Q8NFU3 115 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 USP33Q8TEY7 942 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 ACDQ96AP0 544 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 MED10Q9BTT4 135 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 TTLL2Q9BWV7 592 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 XYLT2Q9H1B5 865 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 DUSP15Q9H1R2 295 aaPredicted RBP12.21□□□□□ -0.45
NEK3-204ENST00000552973 EHD2Q9NZN4 543 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 CFAP97Q9P2B7 532 aa12.21□□□□□ -0.45
NEK3-204ENST00000552973 UBE4BO95155 1302 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 TCHHQ07283 1943 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 PVALEFA0A1B0GWK0 134 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 LRRIQ3A6PVS8 624 aaPredicted RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 FOXD2O60548 495 aaPredicted RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 AKAP3O75969 853 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 YWHAQP27348 245 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 ATICP31939 592 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 PPP3CCP48454 512 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 SNRPFP62306 86 aaKnown RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 CREB5Q02930 508 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 DNM1Q05193 864 aaKnown RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 MESP2Q0VG99 397 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 STK4Q13043 487 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 ORC1Q13415 861 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 PKP1Q13835 747 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 BMT2Q1RMZ1 405 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 PLA2G2CQ5R387 149 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 RESP18Q5W5W9 173 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 ANO7Q6IWH7 933 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 C12orf40Q86WS4 652 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 SCAMP5Q8TAC9 235 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 ZC3H10Q96K80 434 aaKnown RBP12.2□□□□□ -0.46
NEK3-204ENST00000552973 CEP295NLQ96MC4 621 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 SLITRK1Q96PX8 696 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 ELOVL4Q9GZR5 314 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 MAGEF1Q9HAY2 307 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 ZDHHC4Q9NPG8 344 aa12.2□□□□□ -0.46
NEK3-204ENST00000552973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.2□□□□□ -0.46
NEK3-204ENST00000552973 KLRC4O43908 158 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 RHOBTB1O94844 696 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
NEK3-204ENST00000552973 OLFM2O95897 454 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
NEK3-204ENST00000552973 C4BPAP04003 597 aaKnown RBP12.19□□□□□ -0.46
NEK3-204ENST00000552973 HNRNPLP14866 589 aaKnown RBP eCLIP12.19□□□□□ -0.462e-21■■□□□ 11.7
NEK3-204ENST00000552973 PFKLP17858 780 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 TIE1P35590 1138 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 DLG4P78352 724 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 NCOA4Q13772 614 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 ELF2Q15723 593 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 ZNF699Q32M78 642 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 STPG1Q5TH74 334 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 RHBDF2Q6PJF5 856 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 ACOT1Q86TX2 421 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 C12orf56Q8IXR9 622 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 NAT16Q8N8M0 369 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 KIAA0895Q8NCT3 520 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 PARD3BQ8TEW8 1205 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 SNX21Q969T3 373 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 PNKPQ96T60 521 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 EBF1Q9UH73 591 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
NEK3-204ENST00000552973 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 ZNF292O60281 2723 aa12.19□□□□□ -0.46
NEK3-204ENST00000552973 DMXL1Q9Y485 3027 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 COCHO43405 550 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 KRT37O76014 449 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 VNN1O95497 513 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CAVIN2O95810 425 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CCDC130P13994 396 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 BCKDHBP21953 392 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 SLC5A3P53794 718 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 KDSRQ06136 332 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CRY1Q16526 586 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 KMT5BQ4FZB7 885 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 USP39Q53GS9 565 aaKnown RBP12.18□□□□□ -0.46
NEK3-204ENST00000552973 LY6G5CQ5SRR4 150 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 HECTD3Q5T447 861 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
NEK3-204ENST00000552973 RNF43Q68DV7 783 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 SPOPLQ6IQ16 392 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms