RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 EXTL3O43909 919 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 TADA3O75528 432 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 PIGRP01833 764 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 HOXA9P31269 272 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 ARL2P36404 184 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 NPTX2P47972 431 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 VAMP7P51809 220 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 PEX3P56589 373 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 JAM2P57087 298 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 CREMQ03060 361 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 SRSF1Q07955 248 aaKnown RBP eCLIP12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 NAB2Q15742 525 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 ZC2HC1CQ53FD0 456 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 IRF2BP2Q7Z5L9 587 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 RNF149Q8NC42 400 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 MINDY3Q9H8M7 445 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 TRPV5Q9NQA5 729 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 COQ4Q9Y3A0 265 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.37
RBFOX1-214ENST00000552089 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 F8W810 466 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 ASAP2O43150 1006 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 POMCP01189 267 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 CEBPBP17676 345 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 GLRA2P23416 452 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 RAB27AP51159 221 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 POU5F1BQ06416 359 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 STRN3Q13033 797 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 CAPSQ13938 189 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 DPY19L2P1Q6NXN4 242 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 POTEHQ6S545 545 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 RSRC2Q7L4I2 434 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 GCOM2Q9BZD3 368 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 PIN4Q9Y237 131 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 PTPN13Q12923 2485 aa12.76□□□□□ -0.37
RBFOX1-214ENST00000552089 MTCL1Q9Y4B5 1905 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 CLIC2O15247 247 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 SOX5P35711 763 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 KLK7P49862 253 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 CLDN10P78369 228 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 BRD3Q15059 726 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 SLC5A9Q2M3M2 681 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZPBP2Q6X784 338 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 AGMOQ6ZNB7 445 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZNF410Q86VK4 478 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 SYCE1Q8N0S2 351 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZNF710Q8N1W2 664 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 PGBD4Q96DM1 585 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 MYH11P35749 1972 aa12.75□□□□□ -0.37
RBFOX1-214ENST00000552089 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 CCDC151A5D8V7 595 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 EPHB6O15197 1021 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 ZNF623O75123 536 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 ERLIN1O75477 346 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 POU2F2P09086 479 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 CASP4P49662 377 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 CDC42EP1Q00587 391 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 AMPD2Q01433 879 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 MYL7Q01449 175 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 KCNA1Q09470 495 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 RAPGEF1Q13905 1077 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 TCEAL1Q15170 157 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 SURF1Q15526 300 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 USP41Q3LFD5 358 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 KRT39Q6A163 491 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 FAXDC2Q96IV6 333 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
RBFOX1-214ENST00000552089 NLRC4Q9NPP4 1024 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms