RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 C7orf26Q96N11 449 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 MMP19Q99542 508 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 hCG_1818297A0A087WSY0 165 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PMM2O15305 246 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 AVILO75366 819 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SUPT3HO75486 399 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ITGAVP06756 1048 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 EMP3P54852 163 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 IRX4P78413 519 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 BASP1P80723 227 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PLOD1Q02809 727 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 IYDQ6PHW0 289 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PDIK1LQ8N165 341 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PRPF31Q8WWY3 499 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 HSPBAP1Q96EW2 488 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 MRPL47Q9HD33 250 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PACSIN3Q9UKS6 424 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 KBTBD13C9JR72 458 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 KLF11O14901 512 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 TOP3BO95985 862 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SERPINA6P08185 405 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 FUT4P22083 530 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 FDFT1P37268 417 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 CACNB3P54284 484 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 MRPS5P82675 430 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SFSWAPQ12872 951 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 BMPR2Q13873 1038 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 CYLC2Q14093 348 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 CRLF3Q8IUI8 442 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 NUDCD3Q8IVD9 361 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 PPM1NQ8N819 430 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ACTL9Q8TC94 416 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
ERBB3-219ENST00000551242 HBS1LQ9Y450 684 aaKnown RBP12.75□□□□□ -0.37
ERBB3-219ENST00000551242 ZMPSTE24O75844 475 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 IL1BP01584 269 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 IL1R1P14778 569 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SLC5A2P31639 672 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 NOMO3P69849 1222 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 COG7P83436 770 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
ERBB3-219ENST00000551242 TCP10Q12799 353 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SENP7Q9BQF6 1050 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 RBM38Q9H0Z9 239 aaKnown RBP12.74□□□□□ -0.37
ERBB3-219ENST00000551242 C1orf112Q9NSG2 853 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 DTNAQ9Y4J8 743 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
ERBB3-219ENST00000551242 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
ERBB3-219ENST00000551242 KRT34O76011 436 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 NDUFB10O96000 172 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 CBX3Q13185 183 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 VPS72Q15906 364 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SMTNL2Q2TAL5 461 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 TFDP3Q5H9I0 405 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SLC35B2Q8TB61 432 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 LZICQ8WZA0 190 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 POMPQ9Y244 141 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 MAD1L1Q9Y6D9 718 aa12.74□□□□□ -0.37
ERBB3-219ENST00000551242 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 E7ESA3 106 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 CCNT2O60583 730 aaKnown RBP12.73□□□□□ -0.37
ERBB3-219ENST00000551242 LYPLA1O75608 230 aaPredicted RBP12.73□□□□□ -0.37
ERBB3-219ENST00000551242 GDF11O95390 407 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 CDKN2BP42772 138 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 GTF2BQ00403 316 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 OGDHQ02218 1023 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 DCTN2Q13561 401 aaKnown RBP12.73□□□□□ -0.37
ERBB3-219ENST00000551242 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 ATG16L1Q676U5 607 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 UNC45BQ8IWX7 931 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 CFAP36Q96G28 342 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
ERBB3-219ENST00000551242 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
ERBB3-219ENST00000551242 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms