RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	GBP3	Q9H0R5	595 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	LMAN2L	Q9H0V9	348 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	NRDE2	Q9H7Z3	1164 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	EXOC1	Q9NV70	894 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	SLC38A7	Q9NVC3	462 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	RMND1	Q9NWS8	449 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	SNTG2	Q9NY99	539 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	TBC1D7	Q9P0N9	293 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	GMIP	Q9P107	970 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	ANKFY1	Q9P2R3	1169 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	STXBP5L	Q9Y2K9	1186 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	MICAL3	Q7RTP6	2002 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	COL6A3	P12111	3177 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	EYS	Q5T1H1	3165 aa		5.08	□□□□□ -1.6
ATXN2-222	ENST00000550889	XIRP2	A4UGR9	3374 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SMIM28	A0A1B0GU29	152 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	TTC26	A0AVF1	554 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	EPOP	A6NHQ4	379 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	ANKRD63	C9JTQ0	380 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	PTGES	O14684	152 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FGF18	O76093	207 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	DDHD2	O94830	711 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SMC2	O95347	1197 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	EFEMP2	O95967	443 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	POMC	P01189	267 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	ITGB1	P05556	798 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MYB	P10242	640 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	CASP1	P29466	404 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	POLR2B	P30876	1174 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	CTNNB1	P35222	781 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	TNK2	Q07912	1038 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	STK4	Q13043	487 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	TUSC3	Q13454	348 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	GPM6B	Q13491	265 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	CAMK1	Q14012	370 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MYBPC2	Q14324	1141 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	NAB2	Q15742	525 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	ZBTB6	Q15916	424 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	KNOP1	Q1ED39	458 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SLC10A6	Q3KNW5	377 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	COBLL1	Q53SF7	1204 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SPOUT1	Q5T280	376 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FBXW10	Q5XX13	1052 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	ZNF280B	Q86YH2	543 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	C12orf56	Q8IXR9	622 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	GPR65	Q8IYL9	337 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	THNSL1	Q8IYQ7	743 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	GRAMD1C	Q8IYS0	662 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SYCP3	Q8IZU3	236 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SLC39A11	Q8N1S5	342 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	COLGALT1	Q8NBJ5	622 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	KIAA0895	Q8NCT3	520 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SPPL3	Q8TCT6	385 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	POMGNT1	Q8WZA1	660 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	HPS3	Q969F9	1004 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	IGSF21	Q96ID5	467 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SNX27	Q96L92	541 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FAM193B	Q96PV7	902 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	PPP1R10	Q96QC0	940 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FERD3L	Q96RJ6	166 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	RPS6KC1	Q96S38	1066 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MSTO1	Q9BUK6	570 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FGFBP2	Q9BYJ0	223 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	PRDM12	Q9H4Q4	367 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	ASB7	Q9H672	318 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	CERS4	Q9HA82	394 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	KIAA1586	Q9HCI6	787 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SLC39A2	Q9NP94	309 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MIOS	Q9NXC5	875 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	SPG21	Q9NZD8	308 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	PUF60	Q9UHX1	559 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	CPSF3	Q9UKF6	684 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	AGO2	Q9UKV8	859 aa	Known RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MTUS1	Q9ULD2	1270 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	INPP5F	Q9Y2H2	1132 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	GDA	Q9Y2T3	454 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	DERA	Q9Y315	318 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	MTCH2	Q9Y6C9	303 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	UNC79	Q9P2D8	2635 aa		5.07	□□□□□ -1.6
ATXN2-222	ENST00000550889	FSD2	A1L4K1	749 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	GOLGA6L22	H0YM25	854 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	TMEM189-UBE2V1	I3L0A0	370 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	PDXK	O00764	312 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	NRP1	O14786	923 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	GRM6	O15303	877 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	MEFV	O15553	781 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	TGFB1I1	O43294	461 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	EXTL3	O43909	919 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	PRPF6	O94906	941 aa	Known RBP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	FOSL2	P15408	326 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	CYP3A5	P20815	502 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	IBSP	P21815	317 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	PAX3	P23760	479 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	RPL9	P32969	192 aa	Known RBP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	MATR3	P43243	847 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	SCNN1G	P51170	649 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	FAM193A	P78312	1265 aa		5.06	□□□□□ -1.6
ATXN2-222	ENST00000550889	PNOC	Q13519	176 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms