RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 VPS28Q9UK41 221 aa6.74□□□□□ -1.33
LINC02388-201ENST00000550678 MAPRE3Q9UPY8 281 aa6.74□□□□□ -1.33
LINC02388-201ENST00000550678 DNM3Q9UQ16 869 aa6.74□□□□□ -1.33
LINC02388-201ENST00000550678 SETD1AO15047 1707 aaKnown RBP6.74□□□□□ -1.33
LINC02388-201ENST00000550678 MAP3K4Q9Y6R4 1608 aa6.74□□□□□ -1.33
LINC02388-201ENST00000550678 A0A0U1RQJ8 604 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 GOLGA8BA8MQT2 603 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TMEM229AB2RXF0 380 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 BIRC5O15392 142 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 RRP8O43159 456 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 BUB1BO60566 1050 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ATP6V1G2O95670 118 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CLPTM1O96005 669 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 RB1P06400 928 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CKMT1AP12532 417 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 KRT4P19013 534 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 WNT5AP41221 380 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 HSPA13P48723 471 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CD97P48960 835 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 MLLT6P55198 1093 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 NKX3-2P78367 333 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ENPEPQ07075 957 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ACAP2Q15057 778 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SF3B4Q15427 424 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 NDUFA5Q16718 116 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ZNF827Q17R98 1081 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CDONQ4KMG0 1287 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 LACTB2Q53H82 288 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TTMPQ5BVD1 217 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TMEM67Q5HYA8 995 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ALS2CLQ60I27 953 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 PGM2L1Q6PCE3 622 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CRELD2Q6UXH1 353 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 RAD9BQ6WBX8 426 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 UBE3BQ7Z3V4 1068 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ST13P4Q8IZP2 240 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CCNYL1Q8N7R7 359 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 AENQ8WTP8 325 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 STAMBPL1Q96FJ0 436 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TMEM68Q96MH6 324 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 GDAP1L1Q96MZ0 367 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CAMK1GQ96NX5 476 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 PLIN2Q99541 437 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SELENOSQ9BQE4 189 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 KRT23Q9C075 422 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 UBE2OQ9C0C9 1292 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 GBA3Q9H227 469 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 VPS16Q9H269 839 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 NOD2Q9HC29 1040 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 IL1RAPL2Q9NP60 686 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SLC7A8Q9UHI5 535 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 RBM8AQ9Y5S9 174 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SAMD9LQ8IVG5 1584 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 A0A1W2PPL8 197 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SH3D21A4FU49 640 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 DNM1LO00429 736 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 IFIT3O14879 490 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 AXIN1O15169 862 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ADCY3O60266 1144 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 QDPRP09417 244 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 LINGO3P0C6S8 592 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SRGAP2BP0DMP2 458 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CALM1P0DP23 149 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CALM2P0DP24 149 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CALM3P0DP25 149 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 GNAT1P11488 350 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 MYCLP12524 364 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 GNAQP50148 359 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 BPIFB4P59827 614 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 UBE2IP63279 158 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 IFI35P80217 286 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 MYO1EQ12965 1108 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 RALGDSQ12967 914 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 BLMHQ13867 455 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TAF5Q15542 800 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ANKRD20A8PQ5CZ79 823 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 C1orf141Q5JVX7 400 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 IYDQ6PHW0 289 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 NXPE4Q6UWF7 544 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 LBX2Q6XYB7 198 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 PIWIL3Q7Z3Z3 882 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CDAN1Q8IWY9 1227 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 MSANTD3Q96H12 275 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TRIM47Q96LD4 638 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CCDC42Q96M95 316 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 FAM193BQ96PV7 902 aaPredicted RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TSC22D3Q99576 134 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 C1orf21Q9H246 121 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 SPACA1Q9HBV2 294 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ARHGEF38Q9NXL2 777 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TAS2R3Q9NYW6 316 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 LARSQ9P2J5 1176 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ASIC3Q9UHC3 531 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms